Index
A
|
B
|
C
|
D
|
E
|
F
|
G
|
H
|
I
|
J
|
K
|
L
|
M
|
N
|
O
|
P
|
Q
|
R
|
S
|
T
|
U
|
V
|
W
|
X
|
Y
|
Z
A
activate() (spike.Interactive.INTER.SpforSuper method)
AdaptiveETA (class in spike.util.widgets)
add_class() (in module spike.util.dynsubplot)
add_data_representation() (in module spike.File.Spinit)
add_files() (in module spike.v1.Generic)
add_meth() (in module spike.util.dynsubplot)
add_state() (in module spike.File.Spinit)
add_subplot() (spike.Display.fakeplot.fake method)
add_to_msg() (in module spike.util.sendgmail)
addbase() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
addClassCleanup_debug (spike.util.debug_tools.Test_debug_tools attribute)
addCleanup_debug (spike.util.debug_tools.Test_debug_tools attribute)
adddata() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
addnoise() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
addTypeEqualityFunc_debug (spike.util.debug_tools.Test_debug_tools attribute)
AnimatedMarker (class in spike.util.widgets)
announce() (spike.Algo.Linpredic.LinpredTests method)
(spike.File.Apex.Apex_Tests method)
(spike.File.BrukerNMR.Bruker_Tests method)
(spike.File.GifaFile.GifaFileTests method)
(spike.File.HDF5File.HDF5_Tests method)
(spike.File.Solarix.Solarix_Tests method)
(spike.File.Thermo.Thermo_Tests method)
(spike.FTICR.FTICR_Tests method)
(spike.NPKConfigParser.Tests method)
(spike.Orbitrap.Orbi_Tests method)
(spike.plugins.Linear_prediction.LinpredicTests method)
(spike.plugins.NMR.Bucketing.BucketingTests method)
(spike.plugins.specials.wavelet.WaveLetTest method)
(spike.Tests.NPKTest method)
(spike.v1.Generic.Generic_Tests method)
ap2d() (in module spike.v1.Generic)
aparm() (in module spike.v1.Generic)
Apex_Tests (class in spike.File.Apex)
apmin() (in module spike.plugins.NMR.apmin)
(in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
apmin2d() (in module spike.v1.Generic)
apmin_original() (in module spike.v1.Generic)
apmin_select() (spike.Interactive.INTER.AvProc1D method)
apod() (in module spike.processing)
(in module spike.util.signal_tools)
(spike.Interactive.INTER.AvProc1D method)
apod_select() (spike.Interactive.INTER.AvProc1D method)
apodise() (in module spike.v1.Generic)
apodise_f() (in module spike.v1.Generic)
apodise_p() (in module spike.v1.Generic)
approx_lambert() (in module spike.plugins.NMR.PALMA)
apsl() (in module spike.v1.Generic)
apsl2d() (in module spike.v1.Generic)
apsl_cp() (in module spike.v1.Generic)
as_cpx() (in module spike.Algo.Cadzow)
(in module spike.NPKData)
as_float() (in module spike.Algo.Cadzow)
(in module spike.NPKData)
assert__debug (spike.util.debug_tools.Test_debug_tools attribute)
assertAlmostEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertAlmostEquals_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertAlmostList() (spike.Algo.Cadzow.CadzowTest method)
assertCountEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertDictContainsSubset_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertDictEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertEquals_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertFalse_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertGreater_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertGreaterEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertIn_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertIs_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertIsInstance_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertIsNone_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertIsNot_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertIsNotNone_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertLess_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertLessEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertListEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertLogs_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertMultiLineEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertNotAlmostEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertNotAlmostEquals_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertNotEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertNotEquals_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertNotIn_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertNotIsInstance_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertNotRegex_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertNotRegexpMatches_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertRaises_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertRaisesRegex_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertRaisesRegexp_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertRegex_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertRegexpMatches_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertSequenceEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertSetEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertTrue_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertTupleEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertWarns_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertWarnsRegex_debug (spike.util.debug_tools.Test_debug_tools attribute)
auditinitial() (in module spike.v1.Generic)
audittrail() (in module spike.v1.Generic)
auto_damp_width() (in module spike.plugins.NMR.PALMA)
autocalib() (in module spike.v1.Generic)
autocalib_old() (in module spike.v1.Generic)
autopoints() (in module spike.plugins.bcorr)
AvProc1D (class in spike.Interactive.INTER)
ax() (spike.util.dynsubplot.subpl class method)
axes_update() (spike.File.HDF5File.HDF5File method)
Axis (class in spike.NPKData)
B
B() (spike.Interactive.INTER.SpforSuper method)
back() (spike.Interactive.FTICR_INTER.Calib method)
(spike.Interactive.FTICR_INTER.MR_interact method)
(spike.Interactive.FTICR_INTER_v2.Calib method)
Bar (class in spike.util.widgets)
base() (spike.File.GifaFile.GifaFileTests method)
baseline0() (in module spike.Algo.BC)
baseline1() (in module spike.Algo.BC)
baseline1D (class in spike.Interactive.INTER)
baseline2D_F2 (class in spike.Interactive.INTER_2D)
bb() (spike.Interactive.FTICR_INTER.MR_interact method)
(spike.Interactive.FTICR_INTER_v2.MR_interact method)
BC_Tests (class in spike.Algo.BC)
bcL1() (in module spike.Algo.BC)
bcL1_paral() (in module spike.Algo.BC)
bcorr() (in module spike.plugins.bcorr)
(in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
bcorr_auto() (in module spike.plugins.bcorr)
bcorr_offset() (in module spike.v1.Generic)
bcorr_quest() (in module spike.v1.Generic)
bcorrp0() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
bcorrp1() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
Bo() (spike.FTICR.FTICRData property)
bokeh_display() (in module spike.plugins.specials.bokeh_display)
borders() (spike.FTMS.FTMSAxis property)
(spike.NPKData.Axis property)
BouncingBar (class in spike.util.widgets)
br() (in module spike.Algo.maxent)
bruker_corr() (in module spike.plugins.NMR.Bruker_NMR_FT)
(in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
Bruker_NMR_FT (class in spike.plugins.NMR.Bruker_NMR_FT)
bruker_proc_phase() (in module spike.plugins.NMR.Bruker_NMR_FT)
Bruker_Tests (class in spike.File.BrukerNMR)
brukerdelay() (in module spike.Miscellaneous.bruker_corr)
brukerdelay_2() (in module spike.Miscellaneous.bruker_corr)
BrukerSMXHandler (class in spike.File.BrukerSMX)
bucket() (in module spike.v1.Generic)
bucket1d() (in module spike.plugins.NMR.Bucketing)
bucket2d() (in module spike.plugins.NMR.Bucketing)
BucketingTests (class in spike.plugins.NMR.Bucketing)
build_default() (spike.v1.Param.NPKParam method)
build_dict() (in module spike.v1.Generic)
burg2d() (in module spike.v1.Generic)
burg2d_back() (in module spike.v1.Generic)
burg2d_mirror() (in module spike.v1.Generic)
burg_back() (in module spike.v1.Generic)
burg_mirror() (in module spike.v1.Generic)
burgc() (in module spike.Algo.Linpredic)
burgr() (in module spike.Algo.Linpredic)
byte_order() (spike.File.GifaFile.GifaFile property)
C
cadfun() (in module spike.Algo.Cadzow)
cadzow() (in module spike.Algo.Cadzow)
cadzow1d() (in module spike.Algo.Cadzow)
cadzow2d() (in module spike.Algo.Cadzow)
cadzow2dmp() (in module spike.Algo.Cadzow)
CadzowTest (class in spike.Algo.Cadzow)
Calib (class in spike.Interactive.FTICR_INTER)
(class in spike.Interactive.FTICR_INTER_v2)
calib() (in module spike.plugins.MS.FTMS_calib)
calib_loadref() (in module spike.plugins.MS.FTMS_calib)
calibdosy() (in module spike.File.BrukerNMR)
(in module spike.plugins.NMR.PALMA)
calibrate() (in module spike.plugins.NMR.Integrate)
(spike.plugins.NMR.Integrate.Integrals method)
cancel() (spike.Interactive.INTER.Timer method)
causal_corr() (in module spike.v1.Generic)
causalize() (in module spike.v1.Generic)
cdSpec() (in module spike.plugins.Fitter)
center() (in module spike.plugins.Peaks)
center2d() (in module spike.plugins.Peaks)
centroid() (in module spike.plugins.Peaks)
centroid1d() (in module spike.plugins.Peaks)
centroid2d() (in module spike.plugins.Peaks)
change_key() (spike.v1.Param.NPKParam method)
change_key_dict() (in module spike.v1.Generic)
check() (spike.Algo.CS_transformations.transformations method)
(spike.Algo.SL0.transformations method)
check1D() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
check2D() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
check3D() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
check_cpx() (in module spike.plugins.NMR.Bruker_NMR_FT)
check_fig() (spike.Interactive.FTICR_INTER.MR_interact method)
(spike.Interactive.FTICR_INTER_v2.MR_interact method)
check_fig1D() (spike.Interactive.FTICR_INTER.MR_interact method)
(spike.Interactive.FTICR_INTER_v2.MR_interact method)
check_real() (in module spike.plugins.NMR.Bruker_NMR_FT)
check_zoom() (spike.NPKData.Axis method)
checknD() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
checkversion() (spike.File.HDF5File.HDF5File method)
chsize() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
cleandir() (in module spike.Tests)
cleanspike() (in module spike.Tests)
clear() (spike.Interactive.INTER.baseline1D method)
close() (spike.File.GifaFile.GifaFile method)
(spike.File.HDF5File.HDF5File method)
col() (in module spike.v1.Kore)
(spike.Interactive.FTICR_INTER.MR method)
(spike.Interactive.FTICR_INTER_v2.MR method)
(spike.v1.Kore.Kore method)
colmz() (spike.Interactive.FTICR_INTER.MR method)
(spike.Interactive.FTICR_INTER_v2.MR method)
com_addbase() (in module spike.v1.Kore)
com_adddata() (in module spike.v1.Kore)
com_addnoise() (in module spike.v1.Kore)
com_apmin() (in module spike.v1.Kore)
com_bcorr() (in module spike.v1.Kore)
com_bcorrp0() (in module spike.v1.Kore)
com_bcorrp1() (in module spike.v1.Kore)
com_bruker_corr() (in module spike.v1.Kore)
com_check1D() (in module spike.v1.Kore)
com_check2D() (in module spike.v1.Kore)
com_check3D() (in module spike.v1.Kore)
com_checknD() (in module spike.v1.Kore)
com_chsize() (in module spike.v1.Kore)
com_col() (in module spike.v1.Kore)
com_com_max() (in module spike.v1.Kore)
com_dfactor() (in module spike.v1.Kore)
com_diag() (in module spike.v1.Kore)
com_dim() (in module spike.v1.Kore)
com_dmax() (in module spike.v1.Kore)
com_dmin() (in module spike.v1.Kore)
com_em() (in module spike.v1.Kore)
com_escale() (in module spike.v1.Kore)
com_evaln() (in module spike.v1.Kore)
com_exchdata() (in module spike.v1.Kore)
com_extract() (in module spike.v1.Kore)
com_fill() (in module spike.v1.Kore)
com_freq() (in module spike.v1.Kore)
com_freq1d() (in module spike.v1.Kore)
com_freq2d() (in module spike.v1.Kore)
com_freq3d() (in module spike.v1.Kore)
com_ft() (in module spike.v1.Kore)
com_ftbis() (in module spike.v1.Kore)
com_get() (in module spike.v1.Kore)
com_get_col() (in module spike.v1.Kore)
com_get_debug() (in module spike.v1.Kore)
com_get_dfactor() (in module spike.v1.Kore)
com_get_dim() (in module spike.v1.Kore)
com_get_dmax() (in module spike.v1.Kore)
com_get_dmin() (in module spike.v1.Kore)
com_get_freq() (in module spike.v1.Kore)
com_get_freq_1_2d() (in module spike.v1.Kore)
com_get_freq_1_3d() (in module spike.v1.Kore)
com_get_freq_1d() (in module spike.v1.Kore)
com_get_freq_2_2d() (in module spike.v1.Kore)
com_get_freq_2_3d() (in module spike.v1.Kore)
com_get_freq_3_3d() (in module spike.v1.Kore)
com_get_itype_1d() (in module spike.v1.Kore)
com_get_itype_2d() (in module spike.v1.Kore)
com_get_itype_3d() (in module spike.v1.Kore)
com_get_Kore_1D() (in module spike.v1.Kore)
com_get_Kore_2D() (in module spike.v1.Kore)
com_get_Kore_3D() (in module spike.v1.Kore)
com_get_noise() (in module spike.v1.Kore)
com_get_npk1d() (in module spike.v1.Kore)
com_get_npk2d() (in module spike.v1.Kore)
com_get_npk3d() (in module spike.v1.Kore)
com_get_offset_1_2d() (in module spike.v1.Kore)
com_get_offset_1_3d() (in module spike.v1.Kore)
com_get_offset_1d() (in module spike.v1.Kore)
com_get_offset_2_2d() (in module spike.v1.Kore)
com_get_offset_2_3d() (in module spike.v1.Kore)
com_get_offset_3_3d() (in module spike.v1.Kore)
com_get_ph0() (in module spike.v1.Kore)
com_get_ph1() (in module spike.v1.Kore)
com_get_row() (in module spike.v1.Kore)
com_get_shift() (in module spike.v1.Kore)
com_get_si1_1d() (in module spike.v1.Kore)
com_get_si1_2d() (in module spike.v1.Kore)
com_get_si1_3d() (in module spike.v1.Kore)
com_get_si2_2d() (in module spike.v1.Kore)
com_get_si2_3d() (in module spike.v1.Kore)
com_get_si3_3d() (in module spike.v1.Kore)
com_get_si_tab() (in module spike.v1.Kore)
com_get_specw_1_2d() (in module spike.v1.Kore)
com_get_specw_1_3d() (in module spike.v1.Kore)
com_get_specw_1d() (in module spike.v1.Kore)
com_get_specw_2_2d() (in module spike.v1.Kore)
com_get_specw_2_3d() (in module spike.v1.Kore)
com_get_specw_3_3d() (in module spike.v1.Kore)
com_get_version() (in module spike.v1.Kore)
com_geta_max() (in module spike.v1.Kore)
com_geta_pk1d_a() (in module spike.v1.Kore)
com_geta_pk1d_a_err() (in module spike.v1.Kore)
com_geta_pk1d_f() (in module spike.v1.Kore)
com_geta_pk1d_f_err() (in module spike.v1.Kore)
com_geta_pk1d_p() (in module spike.v1.Kore)
com_geta_pk1d_t() (in module spike.v1.Kore)
com_geta_pk1d_w() (in module spike.v1.Kore)
com_geta_pk1d_w_err() (in module spike.v1.Kore)
com_geta_pk2d_a() (in module spike.v1.Kore)
com_geta_pk2d_a_err() (in module spike.v1.Kore)
com_geta_pk2d_f1f() (in module spike.v1.Kore)
com_geta_pk2d_f1f_err() (in module spike.v1.Kore)
com_geta_pk2d_f1w() (in module spike.v1.Kore)
com_geta_pk2d_f1w_err() (in module spike.v1.Kore)
com_geta_pk2d_f2f() (in module spike.v1.Kore)
com_geta_pk2d_f2f_err() (in module spike.v1.Kore)
com_geta_pk2d_f2w() (in module spike.v1.Kore)
com_geta_pk2d_f2w_err() (in module spike.v1.Kore)
com_geta_pk3d_a() (in module spike.v1.Kore)
com_geta_pk3d_f1f() (in module spike.v1.Kore)
com_geta_pk3d_f1w() (in module spike.v1.Kore)
com_geta_pk3d_f2f() (in module spike.v1.Kore)
com_geta_pk3d_f2w() (in module spike.v1.Kore)
com_geta_pk3d_f3f() (in module spike.v1.Kore)
com_geta_pk3d_f3w() (in module spike.v1.Kore)
com_htoi() (in module spike.v1.Kore)
com_htop() (in module spike.v1.Kore)
com_ift() (in module spike.v1.Kore)
com_iftbis() (in module spike.v1.Kore)
com_invf() (in module spike.v1.Kore)
com_irft() (in module spike.v1.Kore)
com_itoh() (in module spike.v1.Kore)
com_itop() (in module spike.v1.Kore)
com_itype() (in module spike.v1.Kore)
com_join() (in module spike.v1.Kore)
com_lb() (in module spike.v1.Kore)
com_max() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
com_maxdata() (in module spike.v1.Kore)
com_mindata() (in module spike.v1.Kore)
com_minimax() (in module spike.v1.Kore)
com_minus() (in module spike.v1.Kore)
com_modifysize() (in module spike.v1.Kore)
com_modulus() (in module spike.v1.Kore)
com_mult() (in module spike.v1.Kore)
com_mult1d() (in module spike.v1.Kore)
com_multdata() (in module spike.v1.Kore)
com_noise() (in module spike.v1.Kore)
com_offset() (in module spike.v1.Kore)
com_offset1d() (in module spike.v1.Kore)
com_offset2d() (in module spike.v1.Kore)
com_offset3d() (in module spike.v1.Kore)
com_one() (in module spike.v1.Kore)
com_peak() (in module spike.v1.Kore)
com_phase() (in module spike.v1.Kore)
com_pkclear() (in module spike.v1.Kore)
com_plane() (in module spike.v1.Kore)
com_plus() (in module spike.v1.Kore)
com_power2() (in module spike.v1.Kore)
com_proj() (in module spike.v1.Kore)
com_ptoh() (in module spike.v1.Kore)
com_ptoi() (in module spike.v1.Kore)
com_put() (in module spike.v1.Kore)
com_read() (in module spike.v1.Kore)
com_real() (in module spike.v1.Kore)
com_report() (in module spike.v1.Kore)
com_reverse() (in module spike.v1.Kore)
com_revf() (in module spike.v1.Kore)
com_rft() (in module spike.v1.Kore)
com_row() (in module spike.v1.Kore)
com_set_Kore_1D() (in module spike.v1.Kore)
com_set_Kore_2D() (in module spike.v1.Kore)
com_set_Kore_3D() (in module spike.v1.Kore)
com_set_task() (in module spike.v1.Kore)
com_setval() (in module spike.v1.Kore)
com_setval1d() (in module spike.v1.Kore)
com_setval2d() (in module spike.v1.Kore)
com_setval3d() (in module spike.v1.Kore)
com_shift() (in module spike.v1.Kore)
com_sin() (in module spike.v1.Kore)
com_specw() (in module spike.v1.Kore)
com_specw1d() (in module spike.v1.Kore)
com_specw2d() (in module spike.v1.Kore)
com_specw3d() (in module spike.v1.Kore)
com_sqsin() (in module spike.v1.Kore)
com_status() (in module spike.v1.Kore)
com_tm() (in module spike.v1.Kore)
com_val1d() (in module spike.v1.Kore)
com_val2d() (in module spike.v1.Kore)
com_val3d() (in module spike.v1.Kore)
com_vert() (in module spike.v1.Kore)
com_window() (in module spike.v1.Kore)
com_window_reset() (in module spike.v1.Kore)
com_write() (in module spike.v1.Kore)
com_writec() (in module spike.v1.Kore)
com_zero() (in module spike.v1.Kore)
com_zoom() (in module spike.v1.Kore)
comp_interpolate() (spike.NPKData.TimeAxis method)
comp_sizes() (in module spike.processing)
compatibility() (in module spike.v1.Kore)
compute_absmax() (spike.Interactive.FTICR_INTER.MR method)
(spike.Interactive.FTICR_INTER_v2.MR method)
computes_index() (in module spike.plugins.MS.FTMS_calib)
concentring() (spike.Algo.maxent.MaxEnt method)
config_get() (in module spike.v1.Generic)
config_getboolean() (in module spike.v1.Generic)
config_getfloat() (in module spike.v1.Generic)
config_getint() (in module spike.v1.Generic)
conj_ip() (in module spike.NPKData)
contour() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
contourf() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
conv_n_p() (in module spike.plugins.NMR.Bruker_NMR_FT)
(in module spike.v1.Generic)
copy() (spike.Interactive.FTICR_INTER.SuperImpose method)
(spike.Interactive.FTICR_INTER_v2.SuperImpose method)
(spike.Interactive.INTER.Show1Dplus method)
(spike.NMR.NMRData method)
(spike.NPKData.Axis method)
copyaxes() (in module spike.NPKData)
copyaxesfromheader() (spike.File.GifaFile.GifaFile method)
copydiffaxesfromheader() (spike.File.GifaFile.GifaFile method)
copynb() (in module spike.dev_setup)
correctbaseline() (in module spike.Algo.BC)
corrected() (spike.Interactive.INTER.baseline1D method)
correction() (spike.Interactive.INTER.baseline1D method)
CosyToInadequate() (in module spike.v1.Generic)
CosyToSecsy() (in module spike.v1.Generic)
Counter (class in spike.util.counter)
(class in spike.util.widgets)
counting() (in module spike.util.counter)
countTestCases_debug (spike.util.debug_tools.Test_debug_tools attribute)
cpxsize() (spike.NPKData.Axis property)
create_carray() (spike.File.HDF5File.HDF5File method)
create_from_template() (spike.File.HDF5File.HDF5File method)
create_generic() (spike.File.HDF5File.HDF5File method)
create_group() (spike.File.HDF5File.HDF5File method)
create_HDF5_info() (spike.File.HDF5File.HDF5File method)
create_HDF5_nparray() (spike.File.HDF5File.HDF5File method)
create_table() (spike.File.HDF5File.HDF5File method)
create_tables() (spike.File.HDF5File.HDF5File method)
criterion() (in module spike.plugins.NMR.PALMA)
cSpec() (in module spike.plugins.Fitter)
csvTests (class in spike.File.csv)
ctoi() (spike.NPKData.Axis method)
ctoix() (spike.NPKData.Axis method)
ctopivot() (spike.Interactive.INTER.Phaser1D method)
(spike.Interactive.INTER_2D.Phaser2D method)
(spike.Interactive.INTER_MS_turn.Phaser1D method)
Cu_Fast_Hankel2dt() (in module spike.Algo.sane)
Cu_FastHankel_prod_mat_vec() (in module spike.Algo.sane)
Cu_FastHankel_prod_mat_vec_2dt() (in module spike.Algo.sane)
cu_select() (in module spike.Algo.sane)
Cu_vec_mean() (in module spike.Algo.sane)
curmark (spike.util.widgets.AnimatedMarker attribute)
currentunit() (spike.NPKData.Axis property)
currval (spike.util.progressbar.ProgressBar attribute)
curvetest() (spike.Algo.Linpredic.LinpredTests method)
cut() (spike.util.signal_tools.SIGNAL_NOISE method)
D
D_axis() (spike.NPKData.LaplaceAxis method)
d_entropy_Gifa() (in module spike.Algo.maxent)
d_entropy_prior() (in module spike.Algo.maxent)
d_entropy_Skilling() (in module spike.Algo.maxent)
data_representation() (in module spike.File.Spinit)
datetime() (spike.util.log_all.Logger method)
(spike.util.log_stderr.Logger method)
(spike.util.mail_error_logger.Logger method)
dB() (in module spike.util.signal_tools)
dc_offset() (in module spike.v1.Generic)
dcalibdosy() (in module spike.plugins.NMR.PALMA)
debounce() (in module spike.Interactive.INTER)
debug() (in module spike.util.debug_tools)
debug_debug (spike.util.debug_tools.Test_debug_tools attribute)
dec_class_pr() (in module spike.util.debug_tools)
decclassdebugging() (in module spike.util.debug_tools)
decrem() (spike.Interactive.INTER_MS_turn.FloatButt method)
default() (spike.Interactive.ipyfilechooser.FileChooser property)
default_filename() (spike.Interactive.ipyfilechooser.FileChooser property)
default_path() (spike.Interactive.ipyfilechooser.FileChooser property)
defaultTestResult_debug (spike.util.debug_tools.Test_debug_tools attribute)
deltamz() (spike.FTMS.FTMSAxis method)
denoise() (in module spike.Algo.Linpredic)
denoise1D() (in module spike.plugins.specials.wavelet)
denoise2D() (in module spike.plugins.specials.wavelet)
derivative() (in module spike.v1.Generic)
determine_chunkshape() (in module spike.File.HDF5File)
(spike.File.HDF5File.HDF5File method)
determine_seqtype() (in module spike.plugins.NMR.PALMA)
dfactor() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
diag() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
diagonal() (in module spike.plugins.MS.diagonal_2DMS)
dict_dump() (in module spike.v1.Generic)
dict_load() (in module spike.v1.Generic)
dict_out() (in module spike.v1.Generic)
dim() (in module spike.v1.Kore)
(spike.File.GifaFile.GifaFile property)
(spike.v1.Kore.Kore method)
directory() (in module spike.Tests)
disconnect_press() (spike.Interactive.INTER.baseline1D method)
(spike.Interactive.INTER.Phaser1D method)
disp() (spike.Interactive.INTER.baseline1D method)
(spike.Interactive.INTER.NMRIntegrate method)
(spike.Interactive.INTER.NMRPeaker1D method)
(spike.Interactive.INTER.Phaser1D method)
(spike.Interactive.INTER.Show1D method)
(spike.Interactive.INTER.SpforSuper method)
(spike.Interactive.INTER_2D.Show2D method)
display() (in module spike.plugins.NMR.Integrate)
(spike.Interactive.FTICR_INTER.MR_interact method)
(spike.Interactive.FTICR_INTER.MSPeaker method)
(spike.Interactive.FTICR_INTER.SpforSuper method)
(spike.Interactive.FTICR_INTER.SuperImpose method)
(spike.Interactive.FTICR_INTER_v2.MR_interact method)
(spike.Interactive.FTICR_INTER_v2.MSPeaker method)
(spike.Interactive.FTICR_INTER_v2.SpforSuper method)
(spike.Interactive.FTICR_INTER_v2.SuperImpose method)
(spike.Interactive.INTER.AvProc1D method)
(spike.plugins.NMR.Integrate.Integrals method)
(spike.plugins.Peaks.Peak1DList method)
(spike.plugins.Peaks.Peak2DList method)
display1D() (spike.Interactive.FTICR_INTER.MR_interact method)
(spike.Interactive.FTICR_INTER_v2.MR_interact method)
display_calib() (in module spike.plugins.MS.FTMS_calib)
display_fit() (in module spike.plugins.Fitter)
display_icalib() (spike.FTMS.FTMSAxis method)
display_peaks() (in module spike.plugins.Peaks)
distcalib() (in module spike.plugins.MS.FTMS_calib)
dLor() (in module spike.plugins.Fitter)
dmax() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
dmin() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
do() (in module spike.dev_setup)
do_chisquare() (spike.Algo.maxent.MaxEnt method)
do_compute() (spike.plugins.NMR.Integrate.Integrals method)
do_entropy() (spike.Algo.maxent.MaxEnt method)
do_open() (in module spike.File.csv)
do_palma() (in module spike.plugins.NMR.PALMA)
do_proc_F1() (in module spike.processing)
do_proc_F1_demodu_modu() (in module spike.processing)
do_proc_F1_modu() (in module spike.processing)
do_proc_F2() (in module spike.processing)
do_proc_F2mp() (in module spike.processing)
do_process2D() (in module spike.processing)
do_Test() (in module spike.Tests)
doClassCleanups_debug (spike.util.debug_tools.Test_debug_tools attribute)
doCleanups_debug (spike.util.debug_tools.Test_debug_tools attribute)
done() (spike.Interactive.FTICR_INTER.MSPeaker method)
(spike.Interactive.FTICR_INTER_v2.MSPeaker method)
down() (spike.Interactive.FTICR_INTER.MR_interact method)
downsample2D() (in module spike.Miscellaneous.downsample)
(in module spike.processing)
downsample2D_med() (in module spike.Miscellaneous.downsample)
draw() (spike.Interactive.INTER.baseline1D method)
(spike.Interactive.INTER.NMRIntegrate method)
(spike.Interactive.INTER.NMRPeaker1D method)
(spike.Interactive.INTER.Phaser1D method)
(spike.Interactive.INTER.Show1D method)
(spike.Interactive.INTER.Show1Dplus method)
(spike.Interactive.INTER.SpforSuper method)
(spike.Interactive.INTER_2D.Phaser2D method)
(spike.Interactive.INTER_2D.Show2D method)
drive_conv() (spike.Algo.maxent.MaxEnt method)
dSpec() (in module spike.plugins.Fitter)
dt2Hankel() (in module spike.Algo.rQRd)
dt2svd() (in module spike.Algo.Cadzow)
dToFit() (in module spike.plugins.Fitter)
dtoi() (spike.NPKData.LaplaceAxis method)
dump() (spike.v1.Param.NPKParam method)
E
em() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
em_wiener() (in module spike.util.signal_tools)
ent() (in module spike.plugins.NMR.PALMA)
entropy() (in module spike.Algo.maxent)
entropy_prior() (in module spike.Algo.maxent)
enum_imap() (in module spike.util.mpiutil)
errorbar() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
escale() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
estimate_SNR() (in module spike.Algo.maxent)
(in module spike.Algo.SL0)
ETA (class in spike.util.widgets)
eval_dosy_noise() (in module spike.plugins.NMR.PALMA)
evaln() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
exchdata() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
expbroad() (in module spike.v1.Generic)
ExpData (class in spike.Algo.maxent)
Export_1D() (in module spike.File.Spinit)
Export_2D() (in module spike.File.Spinit)
Export_proc() (in module spike.File.BrukerNMR)
ext_box() (spike.Interactive.FTICR_INTER.MR_interact method)
(spike.Interactive.FTICR_INTER_v2.MR_interact method)
extract() (in module spike.v1.Kore)
(spike.FTMS.FTMSAxis method)
(spike.NMR.NMRAxis method)
(spike.NPKData.Axis method)
(spike.v1.Kore.Kore method)
F
fail_debug (spike.util.debug_tools.Test_debug_tools attribute)
failIf_debug (spike.util.debug_tools.Test_debug_tools attribute)
failIfAlmostEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
failIfEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
failUnless_debug (spike.util.debug_tools.Test_debug_tools attribute)
failUnlessAlmostEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
failUnlessEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
failUnlessRaises_debug (spike.util.debug_tools.Test_debug_tools attribute)
failureException_debug (spike.util.debug_tools.Test_debug_tools attribute)
fake (class in spike.Display.fakeplot)
fake() (in module spike.plugins.test)
Fast_Hankel2dt() (in module spike.Algo.sane)
(in module spike.Algo.sane_old)
(in module spike.Algo.urQRd)
fastclean() (in module spike.plugins.fastclean)
FastHankel_prod_mat_mat() (in module spike.Algo.sane)
(in module spike.Algo.sane_old)
(in module spike.Algo.urQRd)
FastHankel_prod_mat_vec() (in module spike.Algo.sane)
(in module spike.Algo.sane_old)
(in module spike.Algo.urQRd)
fd (spike.util.progressbar.ProgressBar attribute)
fid_signoise() (in module spike.util.signal_tools)
fid_signoise_type() (in module spike.util.signal_tools)
figure() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
filec_status() (in module spike.v1.Generic)
FileChooser (class in spike.Interactive.ipyfilechooser)
filename() (in module spike.Tests)
FileTransferSpeed (class in spike.util.widgets)
fill (spike.util.widgets.Bar attribute)
(spike.util.widgets.BouncingBar attribute)
(spike.util.widgets.ReverseBar attribute)
fill() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
fill_left (spike.util.widgets.Bar attribute)
(spike.util.widgets.BouncingBar attribute)
(spike.util.widgets.ReverseBar attribute)
fill_table() (spike.File.HDF5File.HDF5File method)
filtering() (in module spike.util.signal_tools)
find_acqu() (in module spike.File.BrukerNMR)
find_acqu2() (in module spike.File.BrukerNMR)
find_acqu3() (in module spike.File.BrukerNMR)
find_acqu_proc_gene() (in module spike.File.BrukerNMR)
find_best_rank() (spike.Algo.sane.OPTK method)
(spike.Algo.sane_old.OPTK method)
find_proc() (in module spike.File.BrukerNMR)
find_proc2() (in module spike.File.BrukerNMR)
find_proc3() (in module spike.File.BrukerNMR)
find_proc_down() (in module spike.File.BrukerNMR)
findnoiselevel() (in module spike.util.signal_tools)
findnoiselevel2() (in module spike.util.signal_tools)
findnoiselevel_2D() (in module spike.util.signal_tools)
findnoiselevel_2D_slice() (in module spike.util.signal_tools)
findnoiselevel_offset() (in module spike.util.signal_tools)
finish() (spike.util.progressbar.ProgressBar method)
finished (spike.util.progressbar.ProgressBar attribute)
fit() (in module spike.plugins.Fitter)
fitpolyL1() (in module spike.Algo.BC)
FitTests (class in spike.plugins.Fitter)
flat_solvent() (in module spike.v1.Generic)
flatten() (in module spike.NPKData)
FloatButt (class in spike.Interactive.INTER_MS_turn)
flush() (spike.File.HDF5File.HDF5File method)
FnMODE() (in module spike.File.BrukerNMR)
FORMAT (spike.util.widgets.FileTransferSpeed attribute)
format_string (spike.util.widgets.AdaptiveETA attribute)
(spike.util.widgets.Counter attribute)
(spike.util.widgets.ETA attribute)
(spike.util.widgets.FormatLabel attribute)
(spike.util.widgets.Timer attribute)
format_time() (spike.util.widgets.Timer static method)
format_updatable() (in module spike.util.widgets)
FormatLabel (class in spike.util.widgets)
forw() (spike.Interactive.FTICR_INTER.MR_interact method)
freq() (in module spike.v1.Kore)
(in module spike.v1.Nucleus)
(spike.v1.Kore.Kore method)
freq1d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
freq2d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
freq3d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
freq_axis() (spike.FTMS.FTMSAxis method)
(spike.NMR.NMRAxis method)
freqB() (in module spike.v1.Nucleus)
from_json() (spike.processing.Proc_Parameters method)
ft() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
FT1D() (in module spike.v1.Process1D)
ft_1d() (in module spike.v1.Process1D)
ft_n_p() (in module spike.plugins.NMR.Bruker_NMR_FT)
(in module spike.v1.Generic)
ft_phase_modu() (in module spike.plugins.NMR.Bruker_NMR_FT)
(in module spike.v1.Generic)
ft_seq() (in module spike.plugins.NMR.Bruker_NMR_FT)
(in module spike.v1.Generic)
ft_sh() (in module spike.plugins.NMR.Bruker_NMR_FT)
(in module spike.v1.Generic)
ft_sh_tppi() (in module spike.plugins.NMR.Bruker_NMR_FT)
(in module spike.v1.Generic)
ft_sim() (in module spike.plugins.NMR.Bruker_NMR_FT)
(in module spike.v1.Generic)
ft_tppi() (in module spike.plugins.NMR.Bruker_NMR_FT)
(in module spike.v1.Generic)
ftbis() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
ftF1() (in module spike.plugins.NMR.Bruker_NMR_FT)
ftF1_spinit() (in module spike.File.Spinit)
ftF2() (in module spike.plugins.NMR.Bruker_NMR_FT)
FTICR_Tests (class in spike.FTICR)
FTICRAxis (class in spike.FTICR)
FTICRData (class in spike.FTICR)
FTMSAxis (class in spike.FTMS)
FTMSData (class in spike.FTMS)
full() (spike.util.signal_tools.SIGNAL_NOISE method)
full_format (spike.plugins.Peaks.Peak1D attribute)
(spike.plugins.Peaks.Peak2D attribute)
fullzoom() (spike.Interactive.FTICR_INTER.MR_interact method)
(spike.Interactive.FTICR_INTER_v2.MR_interact method)
funct_array_simple1() (in module spike.util.mpiutil)
funct_array_simple2() (in module spike.util.mpiutil)
G
gaussbroad() (in module spike.v1.Generic)
gaussenh() (in module spike.plugins.gaussenh)
(in module spike.v1.Generic)
gca() (in module spike.Display.fakeplot)
generate_file() (in module spike.dev_setup)
generate_file_rev() (in module spike.dev_setup)
generate_notes() (in module spike.dev_setup)
generate_version() (in module spike.dev_setup)
Generic_Tests (class in spike.v1.Generic)
get() (in module spike.v1.Kore)
(spike.NPKConfigParser.NPKConfigParser method)
(spike.v1.Kore.Kore method)
get_acquisition_mode() (in module spike.File.Spinit)
get_col() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_contour_data() (in module spike.plugins.specials.bokeh_display)
get_data() (spike.File.GifaFile.GifaFile method)
(spike.File.HDF5File.HDF5File method)
get_data_representation() (in module spike.File.Spinit)
get_debug() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_dfactor() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_dim() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_dir_contents() (in module spike.Interactive.ipyfilechooser)
get_dmax() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_dmin() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_file_infos() (spike.File.HDF5File.HDF5File method)
get_freq() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_freq_1_2d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_freq_1_3d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_freq_1d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_freq_2_2d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_freq_2_3d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_freq_3_3d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_info() (spike.File.HDF5File.HDF5File method)
get_itype() (in module spike.v1.Generic)
get_itype_1d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_itype_2d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_itype_3d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_Kore_1D() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_Kore_2D() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_Kore_3D() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_noise() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_npk1d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_npk2d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_npk3d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_npk_path() (in module spike.v1.Generic)
get_offset_1_2d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_offset_1_3d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_offset_1d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_offset_2_2d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_offset_2_3d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_offset_3_3d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_param() (in module spike.File.Apex)
(in module spike.File.Solarix)
get_params() (spike.File.mzXML.mzXML method)
get_ph0() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_ph1() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_row() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_sampling() (spike.NPKData.Axis method)
get_saved_state() (in module spike.v1.Generic)
get_shift() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_si1_1d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_si1_2d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_si1_3d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_si2_2d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_si2_3d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_si3_3d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_si_tab() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_specw_1_2d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_specw_1_3d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_specw_1d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_specw_2_2d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_specw_2_3d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_specw_3_3d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_subpaths() (in module spike.Interactive.ipyfilechooser)
get_version() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
get_ypoints() (in module spike.plugins.bcorr)
geta_max() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk1d_a() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk1d_a_err() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk1d_f() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk1d_f_err() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk1d_p() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk1d_t() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk1d_w() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk1d_w_err() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk2d_a() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk2d_a_err() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk2d_f1f() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk2d_f1f_err() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk2d_f1w() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk2d_f1w_err() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk2d_f2f() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk2d_f2f_err() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk2d_f2w() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk2d_f2w_err() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk3d_a() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk3d_f1f() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk3d_f1w() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk3d_f2f() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk3d_f2w() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk3d_f3f() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
geta_pk3d_f3w() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
getboolean() (spike.NPKConfigParser.NPKConfigParser method)
getfloat() (spike.NPKConfigParser.NPKConfigParser method)
getint() (spike.NPKConfigParser.NPKConfigParser method)
getslice() (spike.NPKData.Axis method)
getword() (spike.NPKConfigParser.NPKConfigParser method)
GifaFile (class in spike.File.GifaFile)
GifaFileTests (class in spike.File.GifaFile)
grid() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
H
Hankel2dt() (in module spike.Algo.rQRd)
hanning() (in module spike.v1.Generic)
has_param() (in module spike.File.Spinit)
has_parent() (in module spike.Interactive.ipyfilechooser)
hash_make_or_control() (in module spike.util.hashcheck)
hashdir() (in module spike.util.hashcheck)
HDF5_Tests (class in spike.File.HDF5File)
HDF5File (class in spike.File.HDF5File)
hidecode() (in module spike.Interactive.INTER)
hidedoc() (in module spike.Interactive.INTER)
highmass() (spike.FTMS.FTMSData property)
hilbert() (in module spike.v1.Generic)
hip() (spike.util.debug_tools.Test_debug_tools method)
hip_debug (spike.util.debug_tools.Test_debug_tools attribute)
hist() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
hmclear() (in module spike.processing)
hop() (spike.util.debug_tools.Test_debug_tools method)
hop_debug (spike.util.debug_tools.Test_debug_tools attribute)
HT() (in module spike.plugins.specials.pg_sane)
htoi() (in module spike.v1.Kore)
(spike.FTMS.FTMSAxis method)
(spike.NMR.NMRAxis method)
(spike.NMR.NMRData method)
(spike.NPKData.TimeAxis method)
(spike.v1.Kore.Kore method)
htomz() (spike.FTICR.FTICRAxis method)
(spike.FTMS.FTMSAxis method)
(spike.Orbitrap.OrbiAxis method)
htop() (in module spike.v1.Kore)
(spike.NMR.NMRAxis method)
(spike.NMR.NMRData method)
(spike.v1.Kore.Kore method)
htos() (spike.NPKData.TimeAxis method)
HTproj() (in module spike.plugins.specials.pg_sane)
hypercomplex_modulus() (in module spike.NPKData)
Hz_axis() (spike.FTMS.FTMSAxis method)
(spike.NMR.NMRAxis method)
I
I() (spike.Interactive.INTER.SpforSuper method)
I1D() (spike.Interactive.FTICR_INTER.MR_interact method)
(spike.Interactive.FTICR_INTER_v2.MR_interact method)
icalib() (in module spike.plugins.MS.FTMS_calib)
Id() (spike.Algo.CS_transformations.transformations method)
(spike.Algo.SL0.transformations method)
id_debug (spike.util.debug_tools.Test_debug_tools attribute)
ident() (in module spike.NPKData)
ift() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
ift_1d() (in module spike.v1.Process1D)
iftbis() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
ilog2() (in module spike.plugins.specials.wavelet)
Import_1D() (in module spike.File.Apex)
(in module spike.File.Apex0)
(in module spike.File.BrukerMS)
(in module spike.File.BrukerNMR)
(in module spike.File.csv)
(in module spike.File.Solarix)
(in module spike.File.Spinit)
(in module spike.File.Thermo)
Import_1D_proc() (in module spike.File.BrukerNMR)
Import_2D() (in module spike.File.Apex)
(in module spike.File.BrukerMS)
(in module spike.File.BrukerNMR)
(in module spike.File.Solarix)
(in module spike.File.Spinit)
Import_2D_proc() (in module spike.File.BrukerNMR)
Import_DOSY() (in module spike.plugins.NMR.PALMA)
Import_DOSY_proc() (in module spike.plugins.NMR.PALMA)
imzmeas (spike.FTMS.FTMSAxis attribute)
InadequateToCosy() (in module spike.v1.Generic)
increm() (spike.Interactive.INTER_MS_turn.FloatButt method)
init_transform() (spike.Algo.maxent.TransferFunction method)
initCSS() (in module spike.Interactive.INTER)
initial_scene() (in module spike.Algo.maxent)
initial_scene_2delta() (in module spike.Algo.maxent)
initial_scene_delta() (in module spike.Algo.maxent)
initialize() (in module spike.Interactive.INTER)
(in module spike.util.mpiutil)
injectobserve() (spike.Interactive.INTER.SpforSuper method)
int() (spike.Interactive.INTER.NMRIntegrate method)
integ_1d() (in module spike.v1.Process1D)
Integralitem (class in spike.plugins.NMR.Integrate)
Integrals (class in spike.plugins.NMR.Integrate)
integrate() (in module spike.plugins.NMR.Integrate)
(spike.Interactive.INTER.NMRIntegrate method)
integvalues() (spike.plugins.NMR.Integrate.Integrals property)
integzones() (spike.plugins.NMR.Integrate.Integrals property)
intelliround() (in module spike.processing)
intens() (spike.plugins.Peaks.PeakList property)
invf() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
invhilbert() (in module spike.v1.Generic)
irft() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
iSNR() (spike.util.signal_tools.SIGNAL_NOISE property)
iterarg() (in module spike.processing)
iterargF2() (in module spike.processing)
itoc() (spike.NPKData.Axis method)
itoc3() (spike.Interactive.INTER.baseline1D method)
itod() (spike.NPKData.LaplaceAxis method)
itoh() (in module spike.v1.Kore)
(spike.FTMS.FTMSAxis method)
(spike.NMR.NMRAxis method)
(spike.NMR.NMRData method)
(spike.NPKData.TimeAxis method)
(spike.v1.Kore.Kore method)
itoix() (spike.NPKData.Axis method)
itom() (spike.NPKData.TimeAxis method)
itoms() (spike.NPKData.TimeAxis method)
itomz() (spike.FTMS.FTMSAxis method)
itop() (in module spike.v1.Kore)
(spike.NMR.NMRAxis method)
(spike.NMR.NMRData method)
(spike.v1.Kore.Kore method)
itos() (spike.FTMS.FTMSAxis method)
(spike.NMR.NMRAxis method)
(spike.NPKData.TimeAxis method)
itype() (in module spike.v1.Kore)
(spike.File.GifaFile.GifaFile property)
(spike.v1.Kore.Kore method)
ixtoc() (spike.NPKData.Axis method)
ixtoi() (spike.NPKData.Axis method)
J
join() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
JResTilt() (in module spike.v1.Generic)
jsalert() (in module spike.Interactive.INTER)
K
key_is_not_false() (in module spike.v1.Generic)
key_is_true() (in module spike.v1.Generic)
Kore (class in spike.v1.Kore)
L
L1() (in module spike.plugins.NMR.PALMA)
l1calib() (in module spike.plugins.MS.FTMS_calib)
l_num (spike.util.dynsubplot.subpl attribute)
label() (spike.plugins.Peaks.PeakList property)
lambert_w() (in module spike.plugins.NMR.PALMA)
LaplaceAxis (class in spike.NPKData)
largest() (spike.plugins.Peaks.PeakList method)
last_update_time (spike.util.progressbar.ProgressBar attribute)
lax (spike.util.dynsubplot.subpl attribute)
lb() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
left (spike.util.widgets.Bar attribute)
(spike.util.widgets.BouncingBar attribute)
(spike.util.widgets.ReverseBar attribute)
left() (spike.Interactive.FTICR_INTER.MR_interact method)
left_justify (spike.util.progressbar.ProgressBar attribute)
left_shift() (in module spike.v1.Generic)
legend() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
len() (spike.plugins.Peaks.PeakList method)
linear_interpolate() (in module spike.plugins.bcorr)
LinpredicTests (class in spike.plugins.Linear_prediction)
LinpredTests (class in spike.Algo.Linpredic)
load() (in module spike.File.csv)
(in module spike.plugins)
(in module spike.v1.Generic)
(spike.File.GifaFile.GifaFile method)
(spike.File.HDF5File.HDF5File method)
(spike.Interactive.FTICR_INTER.MR method)
(spike.Interactive.FTICR_INTER_v2.MR method)
(spike.Interactive.INTER.AvProc1D method)
(spike.processing.Proc_Parameters method)
(spike.v1.Param.NPKParam method)
load2D() (spike.Interactive.FTICR_INTER_v2.MS2Dscene method)
load_header() (in module spike.File.Spinit)
(spike.File.GifaFile.GifaFile method)
load_input() (in module spike.processing)
load_qvalues() (spike.NPKData.LaplaceAxis method)
load_sampling() (spike.NPKData.Axis method)
load_tabval() (spike.NPKData.TimeAxis method)
loadfolder() (in module spike.plugins)
loadone() (in module spike.plugins)
local_proj() (in module spike.v1.Generic)
local_proj_3d() (in module spike.v1.Generic)
locate_acquisition() (in module spike.File.Apex)
(in module spike.File.Solarix)
locate_ExciteSweep() (in module spike.File.Solarix)
Logger (class in spike.util.log_all)
(class in spike.util.log_stderr)
(class in spike.util.log_stdout)
(class in spike.util.mail_error_logger)
loglog() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
Logo() (in module spike.Interactive.INTER)
Logofile() (in module spike.Interactive.INTER)
longMessage_debug (spike.util.debug_tools.Test_debug_tools attribute)
Lor() (in module spike.plugins.Fitter)
lowmass() (spike.FTMS.FTMSAxis property)
lpext() (in module spike.plugins.Linear_prediction)
lpext1d() (in module spike.plugins.Linear_prediction)
lpext2d() (in module spike.plugins.Linear_prediction)
lplot (spike.util.dynsubplot.subpl attribute)
ltitle (spike.util.dynsubplot.subpl attribute)
lxlabel (spike.util.dynsubplot.subpl attribute)
lxticklabels (spike.util.dynsubplot.subpl attribute)
lylabel (spike.util.dynsubplot.subpl attribute)
M
mac() (spike.util.log_stderr.Logger method)
(spike.util.mail_error_logger.Logger method)
mail() (in module spike.util.mail_error_logger)
(in module spike.util.sendgmail)
mail_if_error() (spike.util.mail_error_logger.Logger method)
main() (in module spike.Algo)
(in module spike.Display)
(in module spike.Miscellaneous)
(in module spike.processing)
(in module spike.Tests)
(in module spike.util)
(in module spike.util.counter)
make_linecorr_fixedpos() (spike.util.shift_comments.SHIFT_COMMENT method)
make_linecorr_shiftedpos() (spike.util.shift_comments.SHIFT_COMMENT method)
make_noisy_signal() (spike.util.signal_tools.SIGNAL_NOISE method)
make_pure_signal() (spike.util.signal_tools.SIGNAL_NOISE method)
make_str_kargs() (spike.util.dynsubplot.subpl method)
mapping (spike.util.widgets.FormatLabel attribute)
marker (spike.util.widgets.Bar attribute)
(spike.util.widgets.BouncingBar attribute)
(spike.util.widgets.ReverseBar attribute)
markers (spike.util.widgets.AnimatedMarker attribute)
mass_axis() (spike.FTMS.FTMSAxis method)
maxdata() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
maxDiff_debug (spike.util.debug_tools.Test_debug_tools attribute)
MaxEnt (class in spike.Algo.maxent)
MaxEnt1D() (in module spike.v1.Process1D)
maxent_1d() (in module spike.v1.Process1D)
maxent_Tests (class in spike.Algo.maxent)
maxval (spike.util.progressbar.ProgressBar attribute)
md5sum() (in module spike.util.hashcheck)
mfft() (in module spike.util.signal_tools)
(spike.Algo.Cadzow.CadzowTest method)
mindata() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
minimax() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
minus() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
modify_val() (in module spike.File.Spinit)
modifysize() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
module
spike
spike.Algo
spike.Algo.BC
spike.Algo.Cadzow
spike.Algo.CS_transformations
spike.Algo.Linpredic
spike.Algo.maxent
spike.Algo.rQRd
spike.Algo.sane
spike.Algo.sane_old
spike.Algo.savitzky_golay
spike.Algo.SL0
spike.Algo.urQRd
spike.dev_setup
spike.Display
spike.Display.fakeplot
spike.Display.testplot
spike.File
spike.File.Apex
spike.File.Apex0
spike.File.BrukerMS
spike.File.BrukerSMX
spike.File.csv
spike.File.GifaFile
spike.File.HDF5File
spike.File.mzXML
spike.File.Solarix
spike.File.Spinit
spike.File.Thermo
spike.FTICR
spike.FTMS
spike.Interactive
spike.Interactive.FTICR_INTER
spike.Interactive.FTICR_INTER_v2
spike.Interactive.INTER
spike.Interactive.INTER_2D
spike.Interactive.INTER_MS_turn
spike.Interactive.ipyfilechooser
spike.Miscellaneous
spike.Miscellaneous.bruker_corr
spike.Miscellaneous.downsample
spike.NMR
spike.NPKConfigParser
spike.NPKData
spike.NPKError
spike.Orbitrap
spike.plugins
spike.plugins.bcorr
spike.plugins.fastclean
spike.plugins.Fitter
spike.plugins.gaussenh
spike.plugins.Linear_prediction
spike.plugins.MS
spike.plugins.MS.diagonal_2DMS
spike.plugins.MS.FTMS_calib
spike.plugins.MS.PhaseMS
spike.plugins.NMR
spike.plugins.NMR.apmin
spike.plugins.NMR.Bruker_NMR_FT
spike.plugins.NMR.Bucketing
spike.plugins.NMR.Integrate
spike.plugins.NMR.PALMA
spike.plugins.Peaks
spike.plugins.rem_ridge
spike.plugins.sane
spike.plugins.sg
spike.plugins.specials
spike.plugins.specials.bokeh_display
spike.plugins.specials.pg_sane
spike.plugins.specials.wavelet
spike.plugins.test
spike.plugins.urQRd
spike.processing
spike.Tests
spike.util
spike.util.compat
spike.util.counter
spike.util.debug_tools
spike.util.dynsubplot
spike.util.hashcheck
spike.util.log_all
spike.util.log_stderr
spike.util.log_stdout
spike.util.mail_error_logger
spike.util.mpiutil
spike.util.near_prime
spike.util.progressbar
spike.util.readwrite_tools
spike.util.sendgmail
spike.util.shift_comments
spike.util.signal_tools
spike.util.simple_logger2
spike.util.ValErr
spike.util.widgets
spike.v1
spike.v1.Kore
spike.v1.Param
spike.v1.Process1D
spike.version
spike.version_rev
modulus() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
move_xdata() (spike.Interactive.INTER.SpforSuper method)
move_ydata() (spike.Interactive.INTER.SpforSuper method)
movepivot() (in module spike.plugins.MS.PhaseMS)
mprint() (in module spike.util.mpiutil)
mprint_debug() (in module spike.util.mpiutil)
MR (class in spike.Interactive.FTICR_INTER)
(class in spike.Interactive.FTICR_INTER_v2)
MR_interact (class in spike.Interactive.FTICR_INTER)
(class in spike.Interactive.FTICR_INTER_v2)
mrfft() (in module spike.util.signal_tools)
MS2Dscene (class in spike.Interactive.FTICR_INTER_v2)
msg() (in module spike.Tests)
MSPeaker (class in spike.Interactive.FTICR_INTER)
(class in spike.Interactive.FTICR_INTER_v2)
mstoi() (spike.NPKData.TimeAxis method)
mstos() (spike.NPKData.TimeAxis method)
mtoi() (spike.NPKData.TimeAxis method)
mtos() (spike.NPKData.TimeAxis method)
mult() (in module spike.v1.Kore)
(spike.Interactive.INTER.SpforSuper property)
(spike.v1.Kore.Kore method)
mult1d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
multdata() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
mz_axis() (spike.FTMS.FTMSAxis method)
mzcalib() (in module spike.plugins.MS.FTMS_calib)
mzref (spike.FTMS.FTMSAxis attribute)
mztoh() (spike.FTICR.FTICRAxis method)
(spike.FTMS.FTMSAxis method)
(spike.Orbitrap.OrbiAxis method)
mztoi() (spike.FTMS.FTMSAxis method)
mzXML (class in spike.File.mzXML)
mzXML_Tests (class in spike.File.mzXML)
N
nactivate() (spike.Interactive.INTER.SpforSuper method)
name_up() (in module spike.util.debug_tools)
nblock1() (spike.File.GifaFile.GifaFile property)
nblock2() (spike.File.GifaFile.GifaFile property)
nblock3() (spike.File.GifaFile.GifaFile property)
nearfactor() (in module spike.util.near_prime)
neg_wing() (in module spike.plugins.NMR.apmin)
(in module spike.v1.Generic)
next() (spike.util.dynsubplot.subpl method)
(spike.util.progressbar.ProgressBar method)
next_update (spike.util.progressbar.ProgressBar attribute)
NMRAxis (class in spike.NMR)
NMRData (class in spike.NMR)
NMRDataTests (class in spike.NMR)
NMRIntegrate (class in spike.Interactive.INTER)
nmrname() (spike.Interactive.INTER.SpforSuper property)
(spike.Interactive.ipyfilechooser.FileChooser property)
NMRPeaker1D (class in spike.Interactive.INTER)
noise() (in module spike.plugins.specials.pg_sane)
(in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
norm() (in module spike.Algo.SL0)
norme() (in module spike.Algo.Linpredic)
np2txt() (spike.File.mzXML.mzXML method)
nparray_to_fticrd() (in module spike.File.HDF5File)
NPKConfigParser (class in spike.NPKConfigParser)
NPKData() (in module spike.NPKData)
NPKData_plugin() (in module spike.NPKData)
NPKDataTests (class in spike.NPKData)
NPKError
NPKevaluate() (in module spike.v1.Param)
NPKParam (class in spike.v1.Param)
NPKtempfile() (in module spike.v1.Generic)
NPKTest (class in spike.Tests)
num_intervals (spike.util.progressbar.ProgressBar attribute)
NUM_SAMPLES (spike.util.widgets.AdaptiveETA attribute)
numplot (spike.util.dynsubplot.subpl attribute)
O
ob() (spike.Interactive.FTICR_INTER_v2.MR_interact method)
(spike.Interactive.INTER.NMRIntegrate method)
(spike.Interactive.INTER.NMRPeaker1D method)
(spike.Interactive.INTER.Phaser1D method)
(spike.Interactive.INTER.Show1D method)
(spike.Interactive.INTER.SpforSuper method)
(spike.Interactive.INTER_2D.Phaser2D method)
(spike.Interactive.INTER_MS_turn.Phaser1D method)
obdisp() (spike.Interactive.INTER.Show1D method)
offset() (in module spike.File.BrukerNMR)
(in module spike.File.Spinit)
(in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
offset1d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
offset2d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
offset3d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
on_add() (spike.Interactive.INTER.NMRIntegrate method)
(spike.Interactive.INTER.NMRPeaker1D method)
on_addlist() (spike.Interactive.INTER_MS_turn.Phaser1D method)
on_Apply() (spike.Interactive.INTER.Phaser1D method)
(spike.Interactive.INTER_2D.Phaser2D method)
(spike.Interactive.INTER_MS_turn.Phaser1D method)
on_auto() (spike.Interactive.INTER.baseline1D method)
on_cancel() (spike.Interactive.INTER.baseline1D method)
(spike.Interactive.INTER.NMRIntegrate method)
(spike.Interactive.INTER.NMRPeaker1D method)
(spike.Interactive.INTER.Phaser1D method)
(spike.Interactive.INTER_2D.Phaser2D method)
(spike.Interactive.INTER_MS_turn.Phaser1D method)
on_clearlist() (spike.Interactive.INTER_MS_turn.Phaser1D method)
on_done() (spike.Interactive.INTER.baseline1D method)
(spike.Interactive.INTER.NMRIntegrate method)
(spike.Interactive.INTER.NMRPeaker1D method)
(spike.Interactive.INTER.Show1D method)
(spike.Interactive.INTER.Show1Dplus method)
(spike.Interactive.INTER_2D.baseline2D_F2 method)
on_movepivot() (spike.Interactive.INTER.Phaser1D method)
(spike.Interactive.INTER_2D.Phaser2D method)
(spike.Interactive.INTER_MS_turn.Phaser1D method)
on_printlist() (spike.Interactive.INTER_MS_turn.Phaser1D method)
on_rem() (spike.Interactive.INTER.NMRIntegrate method)
(spike.Interactive.INTER.NMRPeaker1D method)
on_reset() (spike.Interactive.FTICR_INTER.Show1D method)
(spike.Interactive.INTER.NMRPeaker1D method)
(spike.Interactive.INTER.Show1D method)
(spike.Interactive.INTER_2D.Show2D method)
on_set() (spike.Interactive.INTER.baseline1D method)
on_setcalib() (spike.Interactive.INTER.NMRPeaker1D method)
on_unset() (spike.Interactive.INTER.baseline1D method)
one() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
open_internal_file() (spike.File.HDF5File.HDF5File method)
OPTK (class in spike.Algo.sane)
(class in spike.Algo.sane_old)
Orbi_Tests (class in spike.Orbitrap)
OrbiAxis (class in spike.Orbitrap)
OrbiData (class in spike.Orbitrap)
OurDelta() (in module spike.Algo.SL0)
P
palma() (in module spike.plugins.NMR.PALMA)
param_line() (in module spike.Interactive.INTER)
param_table() (in module spike.Interactive.INTER)
parse() (in module spike.v1.Param)
parsezoom() (in module spike.NPKData)
Peak (class in spike.plugins.Peaks)
peak() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
Peak1D (class in spike.plugins.Peaks)
peak1d_integ() (in module spike.v1.Generic)
Peak1DList (class in spike.plugins.Peaks)
Peak2D (class in spike.plugins.Peaks)
Peak2DList (class in spike.plugins.Peaks)
peak_aggreg() (in module spike.plugins.Peaks)
peak_and_integrate() (spike.Interactive.INTER.NMRIntegrate method)
peakaggreg() (spike.plugins.Peaks.Peak1DList method)
PeakList (class in spike.plugins.Peaks)
peakpick() (in module spike.plugins.Peaks)
peaks1d() (in module spike.plugins.Peaks)
(spike.Algo.sane.OPTK method)
(spike.Algo.sane_old.OPTK method)
peaks2d() (in module spike.plugins.Peaks)
peakstozones() (spike.plugins.NMR.Integrate.Integrals method)
PeakTests (class in spike.plugins.Peaks)
percent() (spike.util.progressbar.ProgressBar property)
Percentage (class in spike.util.widgets)
percentage() (spike.util.progressbar.ProgressBar method)
pg_sane() (in module spike.plugins.specials.pg_sane)
phase() (in module spike.plugins.MS.PhaseMS)
(in module spike.v1.Kore)
(spike.Interactive.INTER.Phaser1D method)
(spike.Interactive.INTER_2D.Phaser2D method)
(spike.Interactive.INTER_MS_turn.Phaser1D method)
(spike.v1.Kore.Kore method)
phase_n_disp() (spike.Interactive.INTER.Phaser1D method)
phase_pivot() (in module spike.plugins.NMR.apmin)
(in module spike.v1.Generic)
Phaser1D (class in spike.Interactive.INTER)
(class in spike.Interactive.INTER_MS_turn)
Phaser2D (class in spike.Interactive.INTER_2D)
phdisp() (spike.Interactive.INTER_2D.Phaser2D method)
pickpeak() (spike.Interactive.FTICR_INTER.MSPeaker method)
(spike.Interactive.FTICR_INTER_v2.MSPeaker method)
(spike.Interactive.INTER.NMRPeaker1D method)
pk2pandas() (in module spike.plugins.Peaks)
pk2pandas_ms() (in module spike.plugins.Peaks)
pk2pandas_nmr() (in module spike.plugins.Peaks)
pkadd() (spike.plugins.Peaks.Peak1DList method)
pkclear() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
pkexport() (spike.Interactive.FTICR_INTER.MSPeaker method)
(spike.Interactive.FTICR_INTER_v2.MSPeaker method)
pkfilter() (in module spike.v1.Generic)
pklist() (spike.Interactive.FTICR_INTER.MSPeaker method)
(spike.Interactive.FTICR_INTER_v2.MSPeaker method)
(spike.Interactive.INTER.NMRPeaker1D method)
pkprint() (spike.Interactive.FTICR_INTER.MSPeaker method)
(spike.Interactive.FTICR_INTER_v2.MSPeaker method)
(spike.Interactive.INTER.NMRPeaker1D method)
pksym_p() (in module spike.v1.Generic)
pkwrite_p() (in module spike.v1.Generic)
plane() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
plane_size() (in module spike.v1.Generic)
plier() (in module spike.dev_setup)
plot() (in module spike.Algo.maxent)
(in module spike.Display.fakeplot)
(in module spike.Display.testplot)
(spike.Display.fakeplot.fake method)
(spike.util.dynsubplot.subpl class method)
plotname() (in module spike.Display.testplot)
PluginTests (class in spike.plugins)
plus() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
points_axis() (spike.NPKData.Axis method)
poll (spike.util.progressbar.ProgressBar attribute)
poly() (in module spike.Algo.BC)
popup_param_table() (in module spike.Interactive.INTER)
pos() (spike.plugins.Peaks.Peak1DList property)
pos2label() (spike.plugins.Peaks.Peak1DList method)
posF1() (spike.plugins.Peaks.Peak2DList property)
posF2() (spike.plugins.Peaks.Peak2DList property)
position_array() (spike.File.HDF5File.HDF5File method)
post_ft_1d() (in module spike.v1.Process1D)
post_maxent_1d() (in module spike.v1.Process1D)
power2() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
pp() (spike.Interactive.FTICR_INTER.MSPeaker method)
(spike.Interactive.FTICR_INTER_v2.MSPeaker method)
(spike.Interactive.INTER.NMRPeaker1D method)
pp_1d() (in module spike.v1.Process1D)
ppivot() (spike.Interactive.INTER.Phaser1D method)
(spike.Interactive.INTER_2D.Phaser2D method)
(spike.Interactive.INTER_MS_turn.Phaser1D method)
ppm() (in module spike.plugins.MS.FTMS_calib)
(spike.FTMS.FTMSAxis method)
ppm_axis() (spike.NMR.NMRAxis method)
ppm_error() (in module spike.plugins.MS.FTMS_calib)
(spike.FTMS.FTMSAxis method)
PPXAplus() (in module spike.plugins.NMR.PALMA)
pr() (in module spike.util.debug_tools)
(spike.util.debug_tools.Test_debug_tools method)
pre_ft_1d() (in module spike.v1.Process1D)
pred_sizes() (in module spike.processing)
pred_sizes_zf() (in module spike.processing)
predict() (in module spike.Algo.Linpredic)
PREFIXES (spike.util.widgets.FileTransferSpeed attribute)
prepare_amplitudes() (spike.util.signal_tools.SIGNAL_NOISE method)
prepare_frequencies() (spike.util.signal_tools.SIGNAL_NOISE method)
prepare_mat() (spike.File.BrukerSMX.BrukerSMXHandler method)
prepare_palma() (in module spike.plugins.NMR.PALMA)
print() (spike.Interactive.INTER.NMRIntegrate method)
print_time() (in module spike.processing)
proc3d() (in module spike.v1.Generic)
Proc_Parameters (class in spike.processing)
process() (in module spike.plugins.NMR.PALMA)
(spike.Interactive.INTER.AvProc1D method)
ProgressBar (class in spike.util.progressbar)
proj() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
prox_l1() (in module spike.plugins.NMR.PALMA)
prox_l1_Sent() (in module spike.plugins.NMR.PALMA)
prox_l2() (in module spike.plugins.NMR.PALMA)
ptoh() (in module spike.v1.Kore)
(spike.NMR.NMRAxis method)
(spike.NMR.NMRData method)
(spike.v1.Kore.Kore method)
ptoi() (in module spike.v1.Kore)
(spike.NMR.NMRAxis method)
(spike.NMR.NMRData method)
(spike.v1.Kore.Kore method)
put() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
Q
Q() (spike.Algo.maxent.MaxEnt method)
R
raw() (spike.v1.Param.NPKParam method)
read() (in module spike.util.readwrite_tools)
(in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
read_1D() (in module spike.File.BrukerNMR)
(in module spike.File.Spinit)
read_2D() (in module spike.File.Apex)
(in module spike.File.BrukerNMR)
(in module spike.File.Solarix)
(in module spike.File.Spinit)
read_3D() (in module spike.File.Apex)
(in module spike.File.Solarix)
read_correc() (spike.util.shift_comments.SHIFT_COMMENT method)
read_data() (in module spike.Algo.CS_transformations)
(in module spike.File.Thermo)
read_ExciteSweep() (in module spike.File.Solarix)
read_file() (spike.File.BrukerSMX.BrukerSMXHandler method)
read_header() (spike.File.GifaFile.GifaFile method)
read_json() (in module spike.util.readwrite_tools)
read_kargs() (spike.util.dynsubplot.subpl method)
read_param() (in module spike.Algo.CS_transformations)
(in module spike.File.Apex)
(in module spike.File.Apex0)
(in module spike.File.BrukerNMR)
(in module spike.File.Solarix)
(in module spike.File.Spinit)
(in module spike.File.Thermo)
read_ref() (in module spike.plugins.MS.FTMS_calib)
read_scan() (in module spike.File.Apex)
(in module spike.File.Solarix)
read_serie() (in module spike.File.Spinit)
read_smx() (spike.File.BrukerSMX.BrukerSMXHandler method)
read_thermo() (in module spike.File.Thermo)
read_title() (in module spike.File.BrukerNMR)
readc() (spike.File.GifaFile.GifaFile method)
readplist() (in module spike.Interactive.INTER)
readwrite_test (class in spike.util.readwrite_tools)
real() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
recalibrate() (in module spike.plugins.MS.FTMS_calib)
(spike.plugins.NMR.Integrate.Integrals method)
receptivity() (in module spike.v1.Nucleus)
ref_freq() (spike.FTMS.FTMSData property)
ref_mass() (spike.FTMS.FTMSData property)
refresh() (spike.Interactive.ipyfilechooser.FileChooser method)
rem_dsp() (in module spike.plugins.NMR.Bruker_NMR_FT)
rem_ridge() (in module spike.plugins.rem_ridge)
reorder_bck_subm() (spike.File.BrukerSMX.BrukerSMXHandler method)
reorder_subm() (spike.File.BrukerSMX.BrukerSMXHandler method)
report() (in module spike.plugins)
(in module spike.v1.Kore)
(in module spike.v1.Nucleus)
(in module spike.version)
(in module spike.version_rev)
(spike.Algo.CS_transformations.transformations method)
(spike.Algo.maxent.MaxEnt method)
(spike.File.GifaFile.GifaFile method)
(spike.FTICR.FTICRAxis method)
(spike.FTICR.FTICRData method)
(spike.FTMS.FTMSAxis method)
(spike.Interactive.FTICR_INTER.MR method)
(spike.Interactive.FTICR_INTER_v2.MR method)
(spike.NMR.NMRAxis method)
(spike.NPKData.Axis method)
(spike.NPKData.LaplaceAxis method)
(spike.NPKData.TimeAxis method)
(spike.Orbitrap.OrbiAxis method)
(spike.plugins.NMR.Integrate.Integrals method)
(spike.plugins.Peaks.Peak1D method)
(spike.plugins.Peaks.Peak1DList method)
(spike.plugins.Peaks.Peak2D method)
(spike.plugins.Peaks.Peak2DList method)
(spike.processing.Proc_Parameters method)
(spike.v1.Kore.Kore method)
report_convergence() (spike.Algo.maxent.MaxEnt method)
report_format (spike.plugins.Peaks.Peak1D attribute)
(spike.plugins.Peaks.Peak2D attribute)
report_peaks() (in module spike.plugins.Peaks)
Report_Table_Param() (in module spike.processing)
rescale_p1() (spike.Interactive.INTER.Phaser1D method)
reset() (spike.Interactive.FTICR_INTER.MR_interact method)
(spike.Interactive.FTICR_INTER_v2.MR_interact method)
(spike.Interactive.ipyfilechooser.FileChooser method)
reset_track() (spike.Interactive.FTICR_INTER.MR_interact method)
(spike.Interactive.FTICR_INTER_v2.MR_interact method)
resetzoom() (spike.Interactive.FTICR_INTER.MSPeaker method)
residu() (in module spike.plugins.Fitter)
residus() (in module spike.plugins.NMR.PALMA)
retrieve_internal_file() (spike.File.HDF5File.HDF5File method)
retrieve_object() (spike.File.HDF5File.HDF5File method)
reverse() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
ReverseBar (class in spike.util.widgets)
revf() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
revoffset() (in module spike.File.BrukerNMR)
rft() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
right (spike.util.widgets.Bar attribute)
(spike.util.widgets.BouncingBar attribute)
(spike.util.widgets.ReverseBar attribute)
right() (spike.Interactive.FTICR_INTER.MR_interact method)
right_shift() (in module spike.v1.Generic)
RotatingMarker (in module spike.util.widgets)
round() (in module spike.util.ValErr)
row() (in module spike.v1.Kore)
(spike.Interactive.FTICR_INTER.MR method)
(spike.Interactive.FTICR_INTER_v2.MR method)
(spike.v1.Kore.Kore method)
rowmz() (spike.Interactive.FTICR_INTER.MR method)
(spike.Interactive.FTICR_INTER_v2.MR method)
rows() (spike.Interactive.ipyfilechooser.FileChooser property)
rQRd() (in module spike.Algo.rQRd)
rQRdCore() (in module spike.Algo.rQRd)
run_debug (spike.util.debug_tools.Test_debug_tools attribute)
S
sample() (spike.Algo.CS_transformations.transformations method)
(spike.Algo.SL0.transformations method)
sampled() (spike.NPKData.Axis property)
sampling_load() (in module spike.Algo.CS_transformations)
sane() (in module spike.Algo.sane)
(in module spike.Algo.sane_old)
sane_pgTests (class in spike.plugins.specials.pg_sane)
sane_plugin() (in module spike.plugins.sane)
sane_Tests (class in spike.Algo.sane)
(class in spike.Algo.sane_old)
saneCore() (in module spike.Algo.sane)
(in module spike.Algo.sane_old)
save() (in module spike.File.csv)
(spike.File.GifaFile.GifaFile method)
(spike.File.HDF5File.HDF5File method)
save_fticrd() (spike.File.HDF5File.HDF5File method)
save_msh5() (spike.FTMS.FTMSData method)
save_mzXML() (spike.File.mzXML.mzXML method)
save_state() (in module spike.v1.Generic)
save_unit() (in module spike.File.csv)
savitzky_golay() (in module spike.Algo.savitzky_golay)
savitzky_golay2D() (in module spike.Algo.savitzky_golay)
scale1() (spike.Interactive.FTICR_INTER.MR_interact method)
scale_up() (spike.Interactive.FTICR_INTER_v2.MR_interact method)
(spike.Interactive.INTER.Show1D method)
scaledown() (spike.Interactive.FTICR_INTER.MR_interact method)
scaleup() (spike.Interactive.FTICR_INTER.MR_interact method)
scattr() (spike.File.mzXML.mzXML method)
seconds_elapsed (spike.util.progressbar.ProgressBar attribute)
SecsyToCosy() (in module spike.v1.Generic)
select_pos() (spike.util.dynsubplot.subpl method)
selected() (spike.Interactive.ipyfilechooser.FileChooser property)
selected_filename() (spike.Interactive.ipyfilechooser.FileChooser property)
selected_path() (spike.Interactive.ipyfilechooser.FileChooser property)
semilogx() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
semilogy() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
send_mail() (spike.util.mail_error_logger.Logger method)
sep (spike.util.widgets.SimpleProgress attribute)
separate_signal_from_noise() (spike.Algo.sane.OPTK method)
(spike.Algo.sane_old.OPTK method)
set_calib() (in module spike.plugins.MS.FTMS_calib)
set_compression() (spike.File.HDF5File.HDF5File method)
set_data() (spike.File.GifaFile.GifaFile method)
(spike.File.HDF5File.HDF5File method)
set_data_from_fticrd() (spike.File.HDF5File.HDF5File method)
set_itype() (in module spike.v1.Generic)
set_Kore_1D() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
set_Kore_2D() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
set_Kore_3D() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
set_lindisplay() (spike.NPKData.TimeAxis method)
set_logdisplay() (spike.NPKData.TimeAxis method)
set_on_redraw() (spike.Interactive.FTICR_INTER_v2.MR_interact method)
(spike.Interactive.INTER.Show1D method)
set_sampling() (spike.NPKData.Axis method)
Set_Table_Param() (in module spike.processing)
set_task() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
set_title() (spike.Display.fakeplot.fake method)
set_value() (spike.Interactive.INTER.NMRIntegrate method)
set_xlabel() (spike.Display.fakeplot.fake method)
set_xscale() (spike.Display.fakeplot.fake method)
set_xticklabels() (spike.Display.fakeplot.fake method)
set_ylabel() (spike.Display.fakeplot.fake method)
set_yscale() (spike.Display.fakeplot.fake method)
set_yticklabels() (spike.Display.fakeplot.fake method)
setBo() (spike.FTICR.FTICRData method)
setref() (spike.Interactive.FTICR_INTER.Calib method)
setUp() (spike.Algo.Linpredic.LinpredTests method)
setup() (spike.Algo.maxent.MaxEnt method)
(spike.Algo.maxent.maxent_Tests method)
setUp() (spike.File.Apex.Apex_Tests method)
(spike.File.BrukerNMR.Bruker_Tests method)
(spike.File.Solarix.Solarix_Tests method)
(spike.File.Thermo.Thermo_Tests method)
(spike.FTICR.FTICR_Tests method)
(spike.NPKConfigParser.Tests method)
(spike.Orbitrap.Orbi_Tests method)
(spike.plugins.Linear_prediction.LinpredicTests method)
(spike.plugins.NMR.Bucketing.BucketingTests method)
(spike.plugins.specials.wavelet.WaveLetTest method)
(spike.Tests.NPKTest method)
(spike.v1.Generic.Generic_Tests method)
setUp_debug (spike.util.debug_tools.Test_debug_tools attribute)
setup_header() (spike.File.GifaFile.GifaFile method)
setup_test() (spike.Algo.maxent.maxent_Tests method)
setUpClass() (spike.File.HDF5File.HDF5_Tests class method)
setUpClass_debug (spike.util.debug_tools.Test_debug_tools attribute)
setval() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
setval1d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
setval2d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
setval3d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
sexp() (spike.Algo.maxent.MaxEnt method)
SFast_Hankel2dt() (in module spike.Algo.sane)
SFastHankel_prod_mat_vec() (in module spike.Algo.sane)
sg() (in module spike.plugins.sg)
sg2D() (in module spike.plugins.sg)
sgolay_coef() (in module spike.Algo.savitzky_golay)
sgolay_comp() (in module spike.Algo.savitzky_golay)
shear() (in module spike.v1.Generic)
shift() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
SHIFT_COMMENT (class in spike.util.shift_comments)
shortDescription_debug (spike.util.debug_tools.Test_debug_tools attribute)
show() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
(spike.Interactive.FTICR_INTER.MR_interact method)
Show() (spike.Interactive.FTICR_INTER.SuperImpose method)
show() (spike.Interactive.FTICR_INTER_v2.MR_interact method)
Show() (spike.Interactive.FTICR_INTER_v2.SuperImpose method)
show() (spike.Interactive.INTER.AvProc1D method)
(spike.Interactive.INTER_MS_turn.Phaser1D method)
(spike.util.dynsubplot.subpl method)
Show1D (class in spike.Interactive.FTICR_INTER)
(class in spike.Interactive.INTER)
Show1Dplus (class in spike.Interactive.INTER)
Show2D (class in spike.Interactive.INTER_2D)
show_apod() (spike.Interactive.INTER.AvProc1D method)
show_hidden() (spike.Interactive.ipyfilechooser.FileChooser property)
shutdown() (in module spike.util.mpiutil)
sidedisplay() (in module spike.Interactive.INTER_2D)
SIGNAL_NOISE (class in spike.util.signal_tools)
signal_noise() (in module spike.v1.Generic)
signal_set (spike.util.progressbar.ProgressBar attribute)
signal_to_noise() (in module spike.util.signal_tools)
simpledisplay() (spike.Interactive.INTER.SpforSuper method)
SimpleProgress (class in spike.util.widgets)
simulate() (in module spike.plugins.Fitter)
sin() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
size1() (spike.File.GifaFile.GifaFile property)
size2() (spike.File.GifaFile.GifaFile property)
size3() (spike.File.GifaFile.GifaFile property)
skipTest_debug (spike.util.debug_tools.Test_debug_tools attribute)
SL0() (in module spike.Algo.SL0)
SL0_Tests (class in spike.Algo.SL0)
SL0FT() (in module spike.Algo.SL0)
SL0gene() (in module spike.Algo.SL0)
slave() (in module spike.util.mpiutil)
SNR() (in module spike.util.signal_tools)
SNR_dB() (in module spike.util.signal_tools)
(spike.util.signal_tools.SIGNAL_NOISE method)
Solarix_Tests (class in spike.File.Solarix)
solve() (spike.Algo.maxent.MaxEnt method)
space() (in module spike.Interactive.INTER)
spacer() (in module spike.Interactive.INTER)
Spec() (in module spike.plugins.Fitter)
spec() (spike.util.signal_tools.SIGNAL_NOISE property)
spec0() (spike.util.signal_tools.SIGNAL_NOISE property)
spec_box() (spike.Interactive.FTICR_INTER_v2.MR_interact method)
spec_noise() (in module spike.v1.Generic)
spectral_zone() (in module spike.v1.Generic)
specw() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
specw1d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
specw2d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
specw3d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
specwidth() (spike.FTMS.FTMSData property)
SpforSuper (class in spike.Interactive.FTICR_INTER)
(class in spike.Interactive.FTICR_INTER_v2)
(class in spike.Interactive.INTER)
spike
module
spike.Algo
module
spike.Algo.BC
module
spike.Algo.Cadzow
module
spike.Algo.CS_transformations
module
spike.Algo.Linpredic
module
spike.Algo.maxent
module
spike.Algo.rQRd
module
spike.Algo.sane
module
spike.Algo.sane_old
module
spike.Algo.savitzky_golay
module
spike.Algo.SL0
module
spike.Algo.urQRd
module
spike.dev_setup
module
spike.Display
module
spike.Display.fakeplot
module
spike.Display.testplot
module
spike.File
module
spike.File.Apex
module
spike.File.Apex0
module
spike.File.BrukerMS
module
spike.File.BrukerSMX
module
spike.File.csv
module
spike.File.GifaFile
module
spike.File.HDF5File
module
spike.File.mzXML
module
spike.File.Solarix
module
spike.File.Spinit
module
spike.File.Thermo
module
spike.FTICR
module
spike.FTMS
module
spike.Interactive
module
spike.Interactive.FTICR_INTER
module
spike.Interactive.FTICR_INTER_v2
module
spike.Interactive.INTER
module
spike.Interactive.INTER_2D
module
spike.Interactive.INTER_MS_turn
module
spike.Interactive.ipyfilechooser
module
spike.Miscellaneous
module
spike.Miscellaneous.bruker_corr
module
spike.Miscellaneous.downsample
module
spike.NMR
module
spike.NPKConfigParser
module
spike.NPKData
module
spike.NPKError
module
spike.Orbitrap
module
spike.plugins
module
spike.plugins.bcorr
module
spike.plugins.fastclean
module
spike.plugins.Fitter
module
spike.plugins.gaussenh
module
spike.plugins.Linear_prediction
module
spike.plugins.MS
module
spike.plugins.MS.diagonal_2DMS
module
spike.plugins.MS.FTMS_calib
module
spike.plugins.MS.PhaseMS
module
spike.plugins.NMR
module
spike.plugins.NMR.apmin
module
spike.plugins.NMR.Bruker_NMR_FT
module
spike.plugins.NMR.Bucketing
module
spike.plugins.NMR.Integrate
module
spike.plugins.NMR.PALMA
module
spike.plugins.Peaks
module
spike.plugins.rem_ridge
module
spike.plugins.sane
module
spike.plugins.sg
module
spike.plugins.specials
module
spike.plugins.specials.bokeh_display
module
spike.plugins.specials.pg_sane
module
spike.plugins.specials.wavelet
module
spike.plugins.test
module
spike.plugins.urQRd
module
spike.processing
module
spike.Tests
module
spike.util
module
spike.util.compat
module
spike.util.counter
module
spike.util.debug_tools
module
spike.util.dynsubplot
module
spike.util.hashcheck
module
spike.util.log_all
module
spike.util.log_stderr
module
spike.util.log_stdout
module
spike.util.mail_error_logger
module
spike.util.mpiutil
module
spike.util.near_prime
module
spike.util.progressbar
module
spike.util.readwrite_tools
module
spike.util.sendgmail
module
spike.util.shift_comments
module
spike.util.signal_tools
module
spike.util.simple_logger2
module
spike.util.ValErr
module
spike.util.widgets
module
spike.v1
module
spike.v1.Kore
module
spike.v1.Param
module
spike.v1.Process1D
module
spike.version
module
spike.version_rev
module
spline_interpolate() (in module spike.plugins.bcorr)
sqsin() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
start() (spike.Interactive.INTER.Timer method)
(spike.util.progressbar.ProgressBar method)
start_time (spike.util.progressbar.ProgressBar attribute)
state() (in module spike.File.Spinit)
status() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
stoh() (spike.NPKData.TimeAxis method)
stoi() (spike.FTMS.FTMSAxis method)
(spike.NMR.NMRAxis method)
(spike.NPKData.TimeAxis method)
stom() (spike.NPKData.TimeAxis method)
stoms() (spike.NPKData.TimeAxis method)
store() (spike.v1.Param.NPKParam method)
store_internal_file() (spike.File.HDF5File.HDF5File method)
store_internal_object() (spike.File.HDF5File.HDF5File method)
strdate() (in module spike.util.simple_logger2)
subpl (class in spike.util.dynsubplot)
subplot() (in module spike.Display.fakeplot)
subspace_filling_with_rank() (spike.Algo.sane.OPTK method)
(spike.Algo.sane_old.OPTK method)
subTest_debug (spike.util.debug_tools.Test_debug_tools attribute)
summary() (in module spike.Interactive.INTER)
SuperImpose (class in spike.Interactive.FTICR_INTER)
(class in spike.Interactive.FTICR_INTER_v2)
suptitle() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
svd2dt() (in module spike.Algo.Cadzow)
svdclean() (in module spike.Algo.Cadzow)
Symmetrize2D() (in module spike.v1.Generic)
SymmetrizeCosy() (in module spike.v1.Generic)
SymmetrizeInadequate() (in module spike.v1.Generic)
SymmetrizeJRes() (in module spike.v1.Generic)
syntax() (in module spike.File.HDF5File)
szblock1() (spike.File.GifaFile.GifaFile property)
szblock2() (spike.File.GifaFile.GifaFile property)
szblock3() (spike.File.GifaFile.GifaFile property)
T
t_transform() (spike.Algo.maxent.TransferFunction method)
table_update() (spike.File.HDF5File.HDF5File method)
tearDown_debug (spike.util.debug_tools.Test_debug_tools attribute)
tearDownClass_debug (spike.util.debug_tools.Test_debug_tools attribute)
TeeLogger (class in spike.util.simple_logger2)
term_width (spike.util.progressbar.ProgressBar attribute)
Test (class in spike.processing)
test() (in module spike.plugins.NMR.PALMA)
test1D() (spike.Algo.Cadzow.CadzowTest method)
test_1D() (spike.plugins.NMR.Bruker_NMR_FT.Bruker_NMR_FT method)
test_2D() (spike.plugins.NMR.Bruker_NMR_FT.Bruker_NMR_FT method)
test_atob() (spike.FTICR.FTICR_Tests method)
(spike.Orbitrap.Orbi_Tests method)
test_axes_update() (spike.File.HDF5File.HDF5_Tests method)
test_axis() (spike.FTICR.FTICR_Tests method)
test_baseline0() (spike.Algo.BC.BC_Tests method)
test_baseline1() (spike.Algo.BC.BC_Tests method)
test_burg() (spike.Algo.Linpredic.LinpredTests method)
test_center1d() (spike.plugins.Peaks.PeakTests method)
test_center2d() (spike.plugins.Peaks.PeakTests method)
test_compute_simple() (in module spike.util.mpiutil)
test_create_from_fticr() (spike.File.HDF5File.HDF5_Tests method)
test_csv() (spike.File.csv.csvTests method)
test_dampingunit() (spike.NPKData.NPKDataTests method)
test_debug() (spike.util.debug_tools.Test_debug_tools method)
test_debug_debug (spike.util.debug_tools.Test_debug_tools attribute)
Test_debug_tools (class in spike.util.debug_tools)
test_def() (spike.NPKConfigParser.Tests method)
test_dynsub() (spike.util.dynsubplot.Test_dynsubplot method)
Test_dynsubplot (class in spike.util.dynsubplot)
test_fft() (spike.NPKData.NPKDataTests method)
test_filenodes() (spike.File.HDF5File.HDF5_Tests method)
test_fit1d() (spike.plugins.Fitter.FitTests method)
test_flatten() (spike.NPKData.NPKDataTests method)
test_get_data() (spike.File.HDF5File.HDF5_Tests method)
test_hash() (spike.util.hashcheck.Test_hashcheck method)
Test_hashcheck (class in spike.util.hashcheck)
test_hypercomplex_modulus() (spike.NPKData.NPKDataTests method)
test_igor1() (spike.Algo.SL0.SL0_Tests method)
test_import() (spike.File.BrukerNMR.Bruker_Tests method)
test_Import_2D() (spike.File.Apex.Apex_Tests method)
test_Import_2D_keep_mem() (spike.File.Apex.Apex_Tests method)
test_intelli() (spike.processing.Test method)
test_json_numpy1D() (spike.util.readwrite_tools.readwrite_test method)
test_json_numpy2D() (spike.util.readwrite_tools.readwrite_test method)
test_load() (spike.NMR.NMRDataTests method)
(spike.v1.Generic.Generic_Tests method)
test_log() (spike.plugins.Linear_prediction.LinpredicTests method)
test_math() (spike.NPKData.NPKDataTests method)
test_MaxEnt() (spike.Algo.maxent.maxent_Tests method)
test_nparray_to_fticr() (spike.File.HDF5File.HDF5_Tests method)
test_NUS_sampling() (spike.plugins.specials.pg_sane.sane_pgTests method)
test_NUS_sampling2() (spike.plugins.specials.pg_sane.sane_pgTests method)
test_peaks1d() (spike.plugins.Peaks.PeakTests method)
test_peaks2d() (spike.plugins.Peaks.PeakTests method)
test_peaksaggreg1d() (spike.plugins.Peaks.PeakTests method)
test_plugin() (spike.NPKData.NPKDataTests method)
(spike.plugins.PluginTests method)
test_poly() (spike.Algo.BC.BC_Tests method)
test_proc() (spike.processing.Test method)
test_read() (spike.File.GifaFile.GifaFileTests method)
(spike.NPKConfigParser.Tests method)
test_rQRd() (in module spike.Algo.rQRd)
test_sane() (in module spike.Algo.sane)
(in module spike.Algo.sane_old)
(spike.Algo.sane.sane_Tests method)
(spike.Algo.sane_old.sane_Tests method)
test_sane_gene() (in module spike.Algo.sane)
(in module spike.Algo.sane_old)
test_sane_iter_trick() (spike.Algo.sane.sane_Tests method)
(spike.Algo.sane_old.sane_Tests method)
test_saving_1D() (spike.FTICR.FTICR_Tests method)
test_server_worker() (in module spike.util.mpiutil)
test_sexp() (spike.Algo.maxent.maxent_Tests method)
test_sg() (in module spike.Algo.savitzky_golay)
test_simple() (spike.File.mzXML.mzXML_Tests method)
test_TimeAxis() (spike.NPKData.NPKDataTests method)
test_trim1D() (spike.FTICR.FTICR_Tests method)
test_trim2D() (spike.FTICR.FTICR_Tests method)
Test_Units (class in spike.util.signal_tools)
test_unitval() (spike.NMR.NMRDataTests method)
test_urQRd() (in module spike.Algo.urQRd)
test_wave() (spike.plugins.specials.wavelet.WaveLetTest method)
test_write1D() (spike.File.GifaFile.GifaFileTests method)
test_write2D() (spike.File.GifaFile.GifaFileTests method)
test_zf() (spike.NPKData.NPKDataTests method)
(spike.processing.Test method)
Tests (class in spike.NPKConfigParser)
text() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
Thermo_Tests (class in spike.File.Thermo)
tilt() (in module spike.v1.Generic)
TIME_SENSITIVE (spike.util.widgets.AdaptiveETA attribute)
(spike.util.widgets.ETA attribute)
(spike.util.widgets.Timer attribute)
(spike.util.widgets.Widget attribute)
TimeAxis (class in spike.NPKData)
timeit() (in module spike.util.counter)
Timer (class in spike.Interactive.INTER)
(class in spike.util.widgets)
title() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
(spike.util.dynsubplot.subpl class method)
tm() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
Tmax() (spike.NPKData.TimeAxis property)
Tmin() (spike.NPKData.TimeAxis property)
to_display() (spike.Interactive.FTICR_INTER.MR method)
(spike.Interactive.FTICR_INTER_v2.MR method)
to_json() (spike.processing.Proc_Parameters method)
to_pandas() (spike.plugins.NMR.Integrate.Integrals method)
tocomplex() (in module spike.v1.Generic)
tofit() (in module spike.plugins.Fitter)
toreal() (in module spike.v1.Generic)
TransferFunction (class in spike.Algo.maxent)
transform() (spike.Algo.CS_transformations.transformations method)
(spike.Algo.maxent.TransferFunction method)
(spike.Algo.SL0.transformations method)
transformations (class in spike.Algo.CS_transformations)
(class in spike.Algo.SL0)
trimz() (spike.FTMS.FTMSData method)
tsample() (spike.Algo.CS_transformations.transformations method)
(spike.Algo.SL0.transformations method)
ttest_findnoiselevel_2D_slice() (spike.util.signal_tools.Test_Units method)
ttest_multitests_urQRd_npk() (spike.util.signal_tools.Test_Units method)
ttest_multitests_urQRdtrick() (spike.util.signal_tools.Test_Units method)
ttest_noiselevel() (spike.util.signal_tools.Test_Units method)
ttest_signoise() (spike.util.signal_tools.Test_Units method)
ttest_signoise_truncated() (spike.util.signal_tools.Test_Units method)
ttransform() (spike.Algo.CS_transformations.transformations method)
(spike.Algo.SL0.transformations method)
txt2np() (spike.File.mzXML.mzXML method)
typestr() (spike.NPKData.Axis method)
U
Unit (class in spike.NPKData)
unit (spike.util.widgets.FileTransferSpeed attribute)
unit_axis() (spike.NPKData.Axis method)
UnknownLength (class in spike.util.progressbar)
up() (spike.Interactive.FTICR_INTER.MR_interact method)
up0p6_to_0p7() (in module spike.File.HDF5File)
up0p7_to_0p8() (in module spike.File.HDF5File)
up0p8_to_0p9() (in module spike.File.HDF5File)
update() (in module spike.File.HDF5File)
(spike.Interactive.FTICR_INTER.Calib method)
(spike.Interactive.FTICR_INTER.MR_interact method)
(spike.Interactive.FTICR_INTER_v2.Calib method)
(spike.Interactive.FTICR_INTER_v2.MR_interact method)
(spike.plugins.NMR.Integrate.Integralitem method)
(spike.util.progressbar.ProgressBar method)
(spike.util.widgets.AdaptiveETA method)
(spike.util.widgets.AnimatedMarker method)
(spike.util.widgets.Bar method)
(spike.util.widgets.BouncingBar method)
(spike.util.widgets.Counter method)
(spike.util.widgets.ETA method)
(spike.util.widgets.FileTransferSpeed method)
(spike.util.widgets.FormatLabel method)
(spike.util.widgets.Percentage method)
(spike.util.widgets.SimpleProgress method)
(spike.util.widgets.Timer method)
(spike.util.widgets.Widget method)
(spike.util.widgets.WidgetHFill method)
update_interval (spike.util.progressbar.ProgressBar attribute)
update_lambda() (spike.Algo.maxent.MaxEnt method)
update_path() (in module spike.Interactive.ipyfilechooser)
urQRd() (in module spike.Algo.urQRd)
urqrd() (in module spike.plugins.urQRd)
urQRdCore() (in module spike.Algo.urQRd)
urQRdTests (class in spike.plugins.urQRd)
UserLogofile() (in module spike.Interactive.INTER)
V
val1d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
val2d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
val3d() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
ValErr() (in module spike.util.ValErr)
value() (spike.Interactive.INTER_MS_turn.FloatButt property)
vec_mean() (in module spike.Algo.sane)
(in module spike.Algo.sane_old)
(in module spike.Algo.urQRd)
verbose (spike.File.GifaFile.GifaFileTests attribute)
verify() (spike.processing.Proc_Parameters method)
vert() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
W
warning() (in module spike.NPKData)
wavelet() (in module spike.plugins.specials.wavelet)
WaveLetTest (class in spike.plugins.specials.wavelet)
wdw() (in module spike.plugins.NMR.Bruker_NMR_FT)
Widget (class in spike.util.widgets)
WidgetHFill (class in spike.util.widgets)
widgets (spike.util.progressbar.ProgressBar attribute)
window() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
window_reset() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
write() (in module spike.v1.Kore)
(spike.util.log_all.Logger method)
(spike.util.log_stderr.Logger method)
(spike.util.log_stdout.Logger method)
(spike.util.mail_error_logger.Logger method)
(spike.v1.Kore.Kore method)
write_file() (in module spike.File.BrukerNMR)
(spike.File.BrukerSMX.BrukerSMXHandler method)
write_file_1d() (in module spike.v1.Process1D)
write_header() (spike.File.GifaFile.GifaFile method)
write_header_line() (spike.File.GifaFile.GifaFile method)
write_json() (in module spike.util.readwrite_tools)
write_param() (in module spike.File.BrukerNMR)
write_ser() (in module spike.File.Apex)
(in module spike.File.Solarix)
write_smx() (spike.File.BrukerSMX.BrukerSMXHandler method)
writec() (in module spike.v1.Kore)
(spike.File.GifaFile.GifaFile method)
(spike.v1.Kore.Kore method)
writet() (in module spike.v1.Generic)
X
xf1() (in module spike.plugins.NMR.Bruker_NMR_FT)
xf2() (in module spike.plugins.NMR.Bruker_NMR_FT)
xfb() (in module spike.plugins.NMR.Bruker_NMR_FT)
xlabel() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
(spike.util.dynsubplot.subpl class method)
xlim() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
xscale() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
xticklabels() (spike.util.dynsubplot.subpl class method)
Y
ylabel() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
(spike.util.dynsubplot.subpl class method)
ylim() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
yscale() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
Z
zero() (in module spike.v1.Kore)
(spike.v1.Kore.Kore method)
zero_dsp() (in module spike.plugins.NMR.Bruker_NMR_FT)
zerof() (spike.util.signal_tools.SIGNAL_NOISE method)
zerofilling() (spike.Algo.CS_transformations.transformations method)
zerotime() (in module spike.File.BrukerNMR)
(in module spike.File.Spinit)
zonestocurves() (spike.plugins.NMR.Integrate.Integrals method)
zoom() (in module spike.v1.Kore)
(spike.Interactive.FTICR_INTER.MR_interact property)
(spike.v1.Kore.Kore method)
zoom_box() (spike.Interactive.FTICR_INTER.MR_interact method)
(spike.Interactive.FTICR_INTER_v2.MR_interact method)
zoom_in() (spike.Interactive.FTICR_INTER.MR_interact method)
zoom_out() (spike.Interactive.FTICR_INTER.MR_interact method)
zoomwidth() (spike.Interactive.FTICR_INTER.MR_interact method)
spike
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