Basic Statistics
Measure | Value |
---|---|
Filename | MethylC-Seq_mm_fc_1wk_SRR921767_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 100000000 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 21 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CAATCTA | 30 | 1.455961E-6 | 78.34328 | 1 |
AACCCCG | 20 | 0.0021647324 | 70.49008 | 94 |
TCTTCCG | 145 | 0.0 | 68.06419 | 5 |
CTCTTCC | 155 | 0.0 | 66.70443 | 4 |
GCTCTTC | 155 | 0.0 | 66.70443 | 3 |
ACGCTCT | 155 | 0.0 | 63.6855 | 1 |
CTTCCGA | 160 | 0.0 | 61.678642 | 6 |
CGCTCTT | 165 | 0.0 | 59.813477 | 2 |
TCCTAGG | 25 | 0.005238806 | 56.39605 | 5 |
AACTCCT | 65 | 4.814501E-8 | 50.60827 | 94 |
CTCCAGC | 120 | 1.8189894E-12 | 43.077274 | 94 |
TCCGATC | 275 | 0.0 | 42.732697 | 1 |
CCGATCT | 295 | 0.0 | 39.827377 | 2 |
CAGCTAT | 50 | 0.001701666 | 37.604774 | 1 |
CCAGTCC | 105 | 5.125912E-8 | 35.80449 | 94 |
CACCTCT | 55 | 0.002719995 | 34.177013 | 94 |
TCAACTT | 60 | 0.0041642794 | 31.330868 | 3 |
CGATCTT | 250 | 0.0 | 30.077635 | 3 |
TTCCGAT | 375 | 0.0 | 28.822527 | 7 |
ACTCCAT | 115 | 4.205738E-6 | 28.604673 | 94 |