Basic Statistics
Measure | Value |
---|---|
Filename | MethylC-Seq_mm_fc_2wk_SRR921696_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 125723135 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 26 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTTCTGT | 3225 | 0.0 | 24.873472 | 94-95 |
TGCCGTT | 27030 | 0.0 | 21.485098 | 94-95 |
CTTCCGA | 125 | 0.0060515143 | 18.99085 | 1 |
GCTCGTT | 16765 | 0.0 | 18.176525 | 94-95 |
TATGCCT | 5620 | 0.0 | 17.694044 | 94-95 |
TGCCGGT | 990 | 0.0 | 17.260235 | 94-95 |
CCTCGTA | 185 | 2.7775968E-9 | 16.678322 | 90-91 |
TCCGCTT | 115 | 4.3034655E-5 | 16.50979 | 94-95 |
CGTCTTT | 35265 | 0.0 | 16.40738 | 94-95 |
AGAGCTG | 4800 | 0.0 | 16.21743 | 94-95 |
GCCCGTT | 340 | 0.0 | 16.054558 | 94-95 |
GAGCTCT | 10950 | 0.0 | 15.930252 | 94-95 |
TGCCCGT | 140 | 1.3491897E-5 | 15.256815 | 94-95 |
TCCGGCT | 300 | 0.0 | 15.030788 | 94-95 |
TTCCGTT | 4645 | 0.0 | 13.89737 | 94-95 |
AAGAGCC | 1740 | 0.0 | 13.639553 | 94-95 |
ATTCCCT | 300 | 5.2750693E-11 | 13.448601 | 94-95 |
TTTGCCT | 1780 | 0.0 | 13.333047 | 94-95 |
CCGGCTT | 1335 | 0.0 | 13.333046 | 94-95 |
TCTTCTT | 12020 | 0.0 | 13.090568 | 94-95 |