Basic Statistics
Measure | Value |
---|---|
Filename | MethylC-Seq_mm_fc_2wk_SRR921695_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 162959139 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 26 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTTCTGT | 3675 | 0.0 | 27.734337 | 94-95 |
TGCCGTT | 14195 | 0.0 | 25.751608 | 94-95 |
CGTCTTT | 18775 | 0.0 | 21.435722 | 94-95 |
TATGCCT | 6410 | 0.0 | 20.656092 | 94-95 |
GCTCGTT | 9575 | 0.0 | 20.095736 | 94-95 |
GAGCTCT | 10985 | 0.0 | 19.770885 | 94-95 |
CCGATCT | 125 | 0.0060096676 | 19.013683 | 4 |
CTTCCGA | 130 | 0.0075210193 | 18.288794 | 1 |
TACCCAA | 160 | 0.0011834666 | 17.831575 | 1 |
CCCGTCT | 125 | 4.4512763E-6 | 17.146618 | 92-93 |
ATTCCCG | 85 | 0.001756743 | 16.81041 | 92-93 |
TCCGTCT | 3735 | 0.0 | 15.429651 | 94-95 |
GAGCCTG | 125 | 8.545398E-5 | 15.236669 | 90-91 |
TCCGACT | 110 | 5.591638E-4 | 15.154329 | 94-95 |
TATTCCT | 1330 | 0.0 | 14.861334 | 94-95 |
CTGCTTT | 5445 | 0.0 | 14.607636 | 94-95 |
TCCCGTT | 310 | 0.0 | 14.595644 | 94-95 |
TAGCTCT | 870 | 0.0 | 14.507345 | 94-95 |
TCTTCTT | 13595 | 0.0 | 14.503822 | 94-95 |
GGCCGTC | 115 | 7.8308414E-4 | 14.495933 | 92-93 |