Basic Statistics
Measure | Value |
---|---|
Filename | MethylC-Seq_mm_fc_1wk_SRR921770_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 100000000 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 21 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ACGCTCT | 155 | 0.0 | 78.84982 | 1 |
TCTTCCG | 175 | 0.0 | 72.50902 | 5 |
CTCTTCC | 180 | 0.0 | 70.497734 | 4 |
CCGGCCC | 20 | 0.002165918 | 70.480354 | 94 |
GCTCTTC | 185 | 0.0 | 68.59239 | 3 |
CGCTCTT | 185 | 0.0 | 66.05193 | 2 |
CTTCCGA | 215 | 0.0 | 59.006577 | 6 |
CTAAACC | 45 | 0.0010157664 | 41.766136 | 94 |
CCGATCT | 335 | 0.0 | 37.869892 | 9 |
TTCTCTG | 50 | 0.0017029962 | 37.59879 | 2 |
TCCGATC | 345 | 0.0 | 36.772213 | 8 |
TTCCGAT | 445 | 0.0 | 31.676437 | 7 |
CCAATAT | 70 | 0.008833517 | 26.860928 | 1 |
CTAATTC | 70 | 0.008833517 | 26.860928 | 1 |
TCCGCGT | 35 | 0.008845719 | 26.853338 | 30-31 |
TAACCCC | 70 | 0.008851609 | 26.849659 | 94 |
CGATCTG | 120 | 3.433137E-6 | 23.499243 | 3 |
CTCCAGC | 120 | 1.8430634E-4 | 23.493452 | 94 |
ATCACAC | 120 | 1.8430634E-4 | 23.493452 | 94 |
CGATCTT | 290 | 5.456968E-12 | 22.688927 | 3 |