Basic Statistics
Measure | Value |
---|---|
Filename | MethylC-Seq_mm_fc_2wk_SRR921695_1_trimmed.fq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 153372033 |
Sequences flagged as poor quality | 0 |
Sequence length | 20-101 |
%GC | 26 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCCGATC | 65 | 2.3127232E-4 | 33.251694 | 1 |
CCGATCT | 75 | 5.3499255E-4 | 28.819008 | 2 |
CCTAGTT | 95 | 0.0021244043 | 22.75116 | 1 |
GGAGCTC | 165 | 0.0010312792 | 18.201145 | 94-95 |
CCATTGG | 145 | 0.0011590343 | 17.887117 | 1 |
CCATTGT | 240 | 1.3749614E-4 | 14.409066 | 1 |
CTCGTAT | 580 | 3.864625E-8 | 12.081794 | 94-95 |
GCCCTTT | 130 | 0.0041050017 | 11.630632 | 12-13 |
GAGCTCG | 415 | 2.910383E-9 | 11.615274 | 88-89 |
CAGGTCG | 305 | 0.0010391203 | 11.338282 | 1 |
GTCTTCT | 700 | 4.5100023E-8 | 10.725676 | 94-95 |
AGAGCTC | 385 | 3.1312826E-5 | 10.400654 | 94-95 |
GCTCGTA | 440 | 5.1977637E-5 | 10.238145 | 94-95 |
CTATAAG | 940 | 4.9112714E-11 | 9.657141 | 1 |
CTGGTGA | 590 | 4.108999E-6 | 9.524638 | 1 |
CCGTCTT | 635 | 1.793018E-5 | 9.458862 | 94-95 |
GTATGCC | 955 | 4.7361027E-8 | 8.909985 | 94-95 |
AGCTCGT | 490 | 6.114288E-5 | 8.522419 | 92-93 |
GCCGTCT | 630 | 4.471074E-4 | 7.944944 | 94-95 |
CTGTGAA | 920 | 2.3431694E-6 | 7.5177746 | 1 |