Basic Statistics
Measure | Value |
---|---|
Filename | MethylC-Seq_mm_fc_2wk_SRR921694_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 162506120 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 26 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTTCCGA | 100 | 4.9118946E-5 | 28.538525 | 1 |
CTTCTGT | 3875 | 0.0 | 27.624554 | 94-95 |
TGCCGTT | 14110 | 0.0 | 26.35835 | 94-95 |
TCCGATC | 130 | 2.912461E-4 | 21.957993 | 3 |
TATGCCT | 5895 | 0.0 | 21.030043 | 94-95 |
GAGCTCT | 10145 | 0.0 | 20.022032 | 94-95 |
CGTCTTT | 18110 | 0.0 | 19.786144 | 94-95 |
GCTCGTT | 9060 | 0.0 | 18.946321 | 94-95 |
CCGATCT | 155 | 9.5383433E-4 | 18.413994 | 2 |
CCCGTCT | 80 | 0.0011618783 | 17.880592 | 94-95 |
CTGCTTA | 485 | 0.0 | 17.204693 | 94-95 |
CCATTAA | 195 | 2.2544089E-4 | 17.074331 | 1 |
ATGCCGC | 215 | 6.366463E-11 | 16.633108 | 94-95 |
TATTCCT | 1295 | 0.0 | 15.280197 | 94-95 |
AGCCGTC | 255 | 5.2750693E-11 | 14.961803 | 92-93 |
TCTTCTT | 13025 | 0.0 | 14.844439 | 94-95 |
CTGCTTT | 5030 | 0.0 | 14.550939 | 94-95 |
ACCGTCT | 440 | 0.0 | 14.090448 | 92-93 |
TAGCTCT | 965 | 0.0 | 14.082123 | 94-95 |
TGCCTTT | 1900 | 0.0 | 13.802563 | 94-95 |