Basic Statistics
Measure | Value |
---|---|
Filename | MethylC-Seq_mm_fc_2wk_SRR921773_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 142023805 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 26 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTTCTGT | 3550 | 0.0 | 23.73001 | 94-95 |
TGCCGTT | 26720 | 0.0 | 20.532852 | 94-95 |
GCTCGTT | 18720 | 0.0 | 17.746801 | 94-95 |
TATGCCT | 6195 | 0.0 | 17.19899 | 94-95 |
TGCCGCT | 470 | 0.0 | 17.16639 | 94-95 |
TGCCCGT | 125 | 4.6049827E-6 | 17.085606 | 94-95 |
TGCCGGT | 1195 | 0.0 | 16.481932 | 94-95 |
GAGCTCT | 11780 | 0.0 | 16.276611 | 94-95 |
AGAGCTG | 6060 | 0.0 | 16.133274 | 94-95 |
CGTCTTT | 37555 | 0.0 | 15.904255 | 94-95 |
GGGCTCT | 1425 | 0.0 | 15.820005 | 94-95 |
GCCCGTT | 360 | 0.0 | 15.820005 | 94-95 |
TTCCGCT | 200 | 7.8198354E-9 | 15.424506 | 94-95 |
CCCGCTT | 225 | 2.3210305E-9 | 14.765339 | 94-95 |
TGCCCTT | 435 | 0.0 | 14.7289715 | 94-95 |
GCATTCC | 100 | 0.005312466 | 14.237744 | 92-93 |
TTTGCCT | 1915 | 0.0 | 14.12648 | 94-95 |
TATTCCT | 1670 | 0.0 | 14.06749 | 94-95 |
CTCGTAG | 890 | 0.0 | 13.331466 | 94-95 |
TGCCCTC | 695 | 0.0 | 13.31612 | 94-95 |