Basic Statistics
Measure | Value |
---|---|
Filename | MethylC-Seq_mm_fc_1wk_SRR921768_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 100000000 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 21 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCCCATA | 15 | 6.9061655E-4 | 93.99246 | 94 |
ACCCGCT | 20 | 0.0021642137 | 70.49435 | 94 |
TCTTCCG | 160 | 0.0 | 70.49339 | 5 |
ACGCTCT | 150 | 0.0 | 65.81381 | 1 |
CTCTTCC | 165 | 0.0 | 62.660797 | 4 |
GCTCTTC | 170 | 0.0 | 60.817833 | 3 |
CGCTCTT | 165 | 0.0 | 59.82424 | 2 |
CTTCCGA | 225 | 0.0 | 50.128635 | 6 |
TATGCCT | 45 | 0.0010147752 | 41.77443 | 94 |
CCGATCT | 370 | 0.0 | 39.382366 | 2 |
AAGCACC | 60 | 8.833702E-5 | 39.163525 | 94 |
TCCGATC | 380 | 0.0 | 38.350155 | 1 |
GACCTCC | 50 | 0.0017033984 | 37.596985 | 94 |
CCCACGT | 75 | 3.279082E-4 | 31.33082 | 94 |
AAACTCA | 65 | 0.006150358 | 28.929146 | 1 |
TTCCGAT | 390 | 0.0 | 28.920368 | 7 |
CGATCTA | 205 | 3.6379788E-11 | 27.509617 | 3 |
AGCAACC | 35 | 0.008841225 | 26.856138 | 88-89 |
TCATCTT | 105 | 7.432587E-5 | 26.854626 | 4 |
AATCCAG | 90 | 9.527882E-4 | 26.109018 | 94 |