Basic Statistics
Measure | Value |
---|---|
Filename | MethylC-Seq_mm_fc_1wk_SRR921767_1_trimmed.fq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 99942367 |
Sequences flagged as poor quality | 0 |
Sequence length | 20-100 |
%GC | 21 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AACCCCC | 15 | 7.715995E-4 | 91.406265 | 3 |
ACGCTCT | 140 | 0.0 | 78.3634 | 1 |
CGCTCTT | 140 | 0.0 | 78.34823 | 2 |
GCTCTTC | 160 | 0.0 | 77.12404 | 3 |
CTCTTCC | 160 | 0.0 | 74.26759 | 4 |
TCTTCCG | 155 | 0.0 | 73.71569 | 5 |
ATGCTCT | 20 | 0.0024155567 | 68.56797 | 1 |
CCAAAGT | 20 | 0.0024155567 | 68.56797 | 1 |
AAACCCC | 20 | 0.0024174121 | 68.5547 | 2 |
CTTCCGA | 170 | 0.0 | 67.20528 | 6 |
AGACTGC | 25 | 0.00584606 | 54.85438 | 1 |
GACTTAC | 25 | 0.005850239 | 54.84447 | 5 |
CTCAATA | 50 | 3.548516E-5 | 45.711983 | 1 |
CCGATCT | 295 | 0.0 | 41.829987 | 2 |
TCCGATC | 300 | 0.0 | 41.14078 | 1 |
CGATCTG | 100 | 4.2628017E-8 | 36.562504 | 3 |
CAAACTT | 55 | 0.0031147117 | 33.24508 | 1 |
TTCCGAT | 345 | 0.0 | 33.115643 | 7 |
CGATCTA | 170 | 1.6331614E-7 | 24.195776 | 3 |
TGATCTC | 360 | 1.2166358E-5 | 19.123457 | 94 |