All modules for which code is available
- iCallSV.FilterDellyCalls
- iCallSV.Run_Delly
- iCallSV.Run_iAnnotateSV
- iCallSV.Run_samblaster
- iCallSV.Run_targetSeqView
- iCallSV.checkBlackList
- iCallSV.checkHotSpotList
- iCallSV.checkparameters
- iCallSV.combineVCF
- iCallSV.dellyVcf2Tab
- iCallSV.dellyVcf2targetSeqView
- iCallSV.filterAnnotatedSV
- iCallSV.launchThreads
- iCallSV.launch_FilterDellyCalls
- iCallSV.launch_Run_Delly
- iCallSV.make_analysis_dir
- iCallSV.makebamindex
- iCallSV.mergeFinalFiles
- iCallSV.sortbamByCoordinate
- iCallSV.sortbamByReadName