Converted 00_utils_rd.ipynb.
Converted 01_pipelines.ipynb.
Converted 02_mains.ipynb.
Converted 03_utils_plots.ipynb.
Converted 04_utils_clusters.ipynb.
Converted 05_default.ipynb.
Converted 06_preprocess.ipynb.
Converted 07_merge_degfc.ipynb.
Converted 08_polya_sites.ipynb.
Converted 09_utils_multirun.ipynb.
Converted 10_utils_bamfilter.ipynb.
Converted 11_plots.ipynb.
Converted 12_reads_head.ipynb.
Converted index.ipynb.